| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1436023 | 19 (0.820) | 8 (0.360) | 8/242 | NT | 30.7% | intergenic (‑53/+100) | PP_1256/PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase |
| ? | NC_002947 | = 1436102 | 18 (0.810) | intergenic (‑132/+21) | PP_1256/PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase | |||||
GTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGAACAGCGCGTACTGCTGTTCGGCATAGTTGCGCTGAGCGTCGGTCAGGACGTCGGTCTCGTTGAAGTGCAGGCTGTACTC > NC_002947/1435960‑1436248 | gtgAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGga > 2:201118/1‑150 (MQ=255) ggggCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGc < 1:161012/150‑1 (MQ=255) ggCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAg < 1:201118/150‑1 (MQ=255) aGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGgctgc > 1:77105/1‑150 (MQ=255) aTCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGttt > 2:65164/1‑150 (MQ=255) aTCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGttt < 1:363242/150‑1 (MQ=255) aTGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTc < 1:65164/150‑1 (MQ=255) ttACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATAcc < 2:228020/150‑1 (MQ=255) cGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATAc < 2:87829/146‑1 (MQ=255) cGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATAc > 1:87829/1‑146 (MQ=255) gACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCacaggggtcgtaatcccccccatgcatctgcattagatttccaaggaggctacatgcccctc < 2:56809‑M2/150‑63 (MQ=255) aCCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCTacaggggtcgtaatcccccccatgcatctgcattagatttccaaggaggctacatgcccctca < 2:537141‑M2/150‑64 (MQ=255) cTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGa > 2:100291/1‑150 (MQ=255) cTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGa > 2:503011/1‑150 (MQ=255) gTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCacaggggtcgtaatcccccccatgcatctgcattagat < 1:106598‑M2/119‑39 (MQ=255) gTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCacaggggtcgtaatcccccccatgcatctgcattagat > 2:106598‑M2/1‑81 (MQ=255) gAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGAc > 1:250215/1‑122 (MQ=255) gAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGAc < 2:250215/122‑1 (MQ=255) gAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTTGTATGCCAGCTggtc < 2:303915/143‑4 (MQ=255) gAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGTATGCCAGCTggtc > 1:303915/1‑140 (MQ=255) gTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCGGTG‑TTCGCGGGTGAACCCGCTCCTacaggggtcgtaatcccccccatgcatctgcattagatttccaaggaggctac < 1:44319‑M2/125‑54 (MQ=255) gTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCGG‑TGTTCGCGGGTGAACCCGCTCCTacaggggtcgtaatcccccccatgcatctgcattagatttccaaggaggctac > 2:44319‑M2/1‑72 (MQ=255) tCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCTacaggggtcgtaatcccccccatgcatctgcattagatttccaaggaggctacatgcccctcacaggcaacctgctgatcg > 1:537141‑M2/1‑69 (MQ=255) cGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCacaggggtcgtaatcccccccatgcatctgcattagatttccaaggaggctacatgcccctcacaggcaacctgctgatcggccagaggccggtaacc > 1:56809‑M2/1‑52 (MQ=255) gCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGAACAGCGCGTACTGCTGTTCGGCATAGTTGCGCTGa > 1:557281/1‑150 (MQ=255) tG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGAACAAAGCCGACTGCTGTTCGGCATAGTTGCGCTGAGCGTCGGTCAGGACGTCGGTCTCg < 1:503011/150‑1 (MQ=255) gCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGAACAGCGCGTACTGCTGTTCGGCATAGTTGCGCTGAGCGTCGGt > 1:574749/1‑120 (MQ=255) gCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGAACAGCGCGTACTGCTGTTCGGCATAGTTGCGCTGAGCGTCGGt < 2:574749/120‑1 (MQ=255) tCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGAACAGCGCGTACTGCTGTTCGGCATAGTTGCGCTGAGCGTCGGTCAGGACGTCGGTCTCGTTGAAGTGCAGGCTGTACTc < 1:100291/150‑1 (MQ=255) | GTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTG‑A‑TTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGAACAGCGCGTACTGCTGTTCGGCATAGTTGCGCTGAGCGTCGGTCAGGACGTCGGTCTCGTTGAAGTGCAGGCTGTACTC > NC_002947/1435960‑1436248 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |