New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2960543 =	24 (1.030)	4 (0.170)	4/250	NT	14.9%	coding (692/2316 nt)	PP_2590	ferric siderophore receptor
	?	NC_002947	2960572 =	22 (0.960)					coding (663/2316 nt)	PP_2590	ferric siderophore receptor

ACCGAAGCGCCGGCCAACGTCGACATGGCCGCCAAGCTGGGCATCGGAAGCGTAGGTGGCGGTCAGCCGGGTCAGCGGCGTGTCGCCAGCGCGCTTGGGAATCAGGTTGACAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATGCGTTCGTACATTTCGGGTGAGGCGCGGTAGTAGGGGGCCATGCCGAACAGGCCATCGATAGTCATGTCACTGACGCTGGTCTGGAAGCCGCGGATCGAGTAGTTCTCGCT  >  NC_002947/2960431‑2960721                                                                                                                                              |                                                                                                                                                      aCCGAAGCGCCGGCCAACGTCGACATGGCCGCCAAGCTGGGCATCGGAAGCGTAGGTGGCGGTCAGCCGGGTCAGCGGCGTGTCGCCAGCGCGCTTGGGAATCAGGTTGACAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAag                                                                                                                                               >  1:287171/1‑150 (MQ=255) aCCGAAGCGCCGGCCAACGTCGACATGGCCGCCAAGCTGGGCATCGGAAGCGTAGGTGGCGGTCAGCCGGGTCAGCGGCGTGTCGCCAGCGCGCTTGGGAATCAGGTTGACAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAag                                                                                                                                               >  2:274434/1‑150 (MQ=255)               cAACGTCGACATGGCCGCCAAGCTGGGCATCGGAAGCGTAGGTGGCGGTCAGCCGGGTCAGCGGCGTGTCGCCAGCGCGCTTGGGAATCAGGTTGACAATACCGACCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACgg                                                                                                                                   >  2:394325/1‑148 (MQ=255)               cAACGTCGACATGGCCGCCAAGCTGGGCATCGGAAGCGTAGGTGGCGGTCAGCCGGGTCAGCGGCGTGTCGCCAGCGCGCTTGGGAATCAGGTTGACAATACCGACCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACgg                                                                                                                                   <  1:394325/148‑1 (MQ=255)                   gTCGACATGGCCGCCAAGCTGGGCATCGGAAGCGTAGGTGGCGGTCAGCCGGGTCAGCGGCGTGTCGCCAGCGCGCTTGGGAATCAGGTTGACAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCttt                                                                                                                             <  2:287171/150‑1 (MQ=255)                          tGGCCGCCAAGCTGGGCATCGGAAGCGTAGGTGGCGGTCAGCCGGGTCAGCGGCGTGTCGCCAGCGCGCTTGGGAATCAGGTTGAAAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCttt                                                                                                                             <  1:357912/143‑1 (MQ=255)                          tGGCCGCCAAGCTGGGCATCGGAAGCGTAGGTGGCGGTCAGCCGGGTCAGCGGCGTGTCGCCAGCGCGCTTGGGAATCAGGTTGAAAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCttt                                                                                                                             >  2:357912/1‑143 (MQ=255)                           ggCCGCCAAGCTGGGCATCGGAAGCGTAGGTGGCGGTCAGCCGGGTCAGCGGCGTGTCGCCAGCGCGCTTGGGAATCAGGTTGACAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACtt                                                                                                                     <  2:424925/150‑1 (MQ=255)                               gccAAGCTGGGCATCGGAAGCGTAGGTGGCGGTCAGCCGGGTCAGCGGCGTGTCGCCAGCGCGCTTGGGAATCAGGTTGACAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGAt                                                                                                                 <  2:77811/150‑1 (MQ=255)                                ccAAGCTGGGCATCGGAAGCGTAGGTGGCGGTCAGCCGGGTCAGCGGCGTGTCGCCAGCGCGCTTGGGAATCAGGTTGACAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATg                                                                                                                >  2:553857/1‑150 (MQ=255)                                atggccccctactaccgcgcctcacccgaaatgtacgaacgcatcgaagtactcaaaggcccgtcggcgctgcttaacggcATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAag                                                                                                                                               <  1:27446‑M1/38‑1 (MQ=255)                                atggccccctactaccgcgcctcacccgaaatgtacgaacgcatcgaagtactcaaaggcccgtcggcgctgcttaacggcATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAag                                                                                                                                               >  2:27446‑M1/82‑119 (MQ=255)                                    ccccctactaccgcgcctcacccgaaatgtacgaacgcatcgaagtactcaaaggcccgtcggcgctgcttaacggcataccgcccaccggaccgccgggcggcatGCCGTTAagcagc                                                                                                                                           <  1:579390‑M2/13‑1 (MQ=255)                                    ccccctactaccgcgcctcacccgaaatgtacgaacgcatcgaagtactcaaaggcccgtcggcgctgcttaacggcataccgcccaccggaccgccgggcggcatGCCGTTAagcagc                                                                                                                                           >  2:579390‑M2/107‑119 (MQ=255)                                                  gCGTAGGTGGCGGTCAGCCGGGTCAGCGGCGTGTCGCGAGCGCGCTTGGGAATCAGGTTGACAATACCGCCCACGAAACCGCCTGTCGGGATGGCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATGCGTTCGTACATTTCGGGt                                                                                              >  1:533457/1‑150 (MQ=255)                                                  gCGTAGGTGGCGGTCAGCCGGGTCAGCGGCGTGTCGCCAGCGCGCTTGGGAATCAGGTTGACAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATGCGTTCGTACATTTCGGGt                                                                                              <  1:297127/150‑1 (MQ=255)                                                        gTGGCGGTCAGCCGGGTCAGCGGCGTGTCGCCAGCGCGCTTGGGAATCAGGTTGACAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATGCGTTCGTACATTTCGGGTGAGgcg                                                                                        >  1:108461/1‑150 (MQ=255)                                                             ggTCAGCCGGGTCAGCGGCGTGTCGCCAGCGCGCTTGGGAATCAGGTTGACAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATGCGTTCGTACATTTCGGGTGAGGCGCGgta                                                                                   >  2:123956/1‑150 (MQ=255)                                                                               cgTGTCGCCAGCGCGCTTGGGAATCAGGTTGACAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATGCGTTCGTACATTTCGGGTGAGGCGCGGTAGTAGGGGGCCATGCCGaa                                                                 <  2:108461/150‑1 (MQ=255)                                                                                        aGCGCGCTTGGGAATCAGGTTGACAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCTTTGa                                                                                                                           <  1:371765/83‑1 (MQ=255)                                                                                        aGCGCGCTTGGGAATCAGGTTGACAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCTTTGa                                                                                                                           >  2:371765/1‑83 (MQ=255)                                                                                               ttGGGAATCAGGTTGACAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATGCGTTCGTACATTTCGGGTGAGGCGCGGTAGTAGGGGGCCATGCCGAACAGGCCATCGATAGTc                                                 <  1:553857/150‑1 (MQ=255)                                                                                                    gctgcttaacggcATGCCGCCCGGCGGTCCGGTGGGCGGTATGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATGCGTTCGTACATTTCGGGTGAGGCGCGGTAGTAggggg                                                                           <  1:579390‑M1/106‑1 (MQ=255)                                                                                                    gctgcttaacggcATGCCGCCCGGCGGTCCGGTGGGCGGTATGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATGCGTTCGTACATTTCGGGTGAGGCGCGGTAGTAggggg                                                                           >  2:579390‑M1/14‑119 (MQ=255)                                                                                                       cAGGTTGACAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATGCGTTCGTACATTTCGGGTGAGGCGCGGTAGTAGGGGGCCATGCCGAACAGGCCATCGATAGTCATGTCACt                                         >  1:212226/1‑150 (MQ=255)                                                                                                        cttaacggcatgccgcccggcggttcggtgggcggtatGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATGCGTTCGTACATTTCGGGTGAGGCGCGGTAGTAGGGGGCCAt                                                                       >  2:27446‑M2/39‑119 (MQ=255)                                                                                                        cttaacggcatgccgcccggcggttcggtgggcggtatGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATGCGTTCGTACATTTCGGGTGAGGCGCGGTAGTAGGGGGCCAt                                                                       <  1:27446‑M2/81‑1 (MQ=255)                                                                                                                        ccACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATGCGTTCGTACATTTCGGGTGAGGCGCGGTAGTAGGGGGCCATGCCGAACAgg                                                             <  2:35808/113‑1 (MQ=255)                                                                                                                        ccACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATGCGTTCGTACATTTCGGGTGAGGCGCGGTAGTAGGGGGCCATGCCGAACAgg                                                             >  1:35808/1‑113 (MQ=255)                                                                                                                                   ccgGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATGCGTTCGTACATTTCGGGTGAGGCGCGGTAGTAGGGGGCCATGCCGAACAGGCCATCGATAGTCATGTCACTGACGCTGGTCTGGAAGCCGCGGATCGag             >  1:522339/1‑150 (MQ=255)                                                                                                                                              gCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATGCGTTCGTACATTTCGGGTGAGGCGCGGTAGTAGGGGGCCATGCCGAACAGGCCATCGATAGTCATGTCACTGACGCTGGTCTGGAAGCCGCGGATCGAGTAGAtcggaag  >  1:285929/1‑145 (MQ=255)                                                                                                                                              |                                                                                                                                                      ACCGAAGCGCCGGCCAACGTCGACATGGCCGCCAAGCTGGGCATCGGAAGCGTAGGTGGCGGTCAGCCGGGTCAGCGGCGTGTCGCCAGCGCGCTTGGGAATCAGGTTGACAATACCGCCCACCGAACCGCCGGGCGGCATGCCGTTAAGCAGCGCCGACGGGCCTTTGAGTACTTCGATGCGTTCGTACATTTCGGGTGAGGCGCGGTAGTAGGGGGCCATGCCGAACAGGCCATCGATAGTCATGTCACTGACGCTGGTCTGGAAGCCGCGGATCGAGTAGTTCTCGCT  >  NC_002947/2960431‑2960721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.