New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1419553 =	11 (0.430)	6 (0.310)	6/208	1.6	33.9%	intergenic (‑36/+101)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	1419647 =	15 (0.770)					intergenic (‑130/+7)	PP_1242/PP_1244	hypothetical protein/hypothetical protein

GGCTGGTCGAGTCGGCGTTGATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1419727‑1419553 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGT  >  NC_002947/1419647‑1419795                                                                                                                                                                                                                                                                                                                                      GGCTGGTCGAGTCGGCGTTGATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGG                                                                                                                                                                                <  1:428754/150‑1                 GTTGATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGC                                                                                                                                                                >  1:119703/1‑150                      TGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTCCATTAGCAGGTCAGGCCTCTTCGCGGGCAGGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGA                                                                                                                                                           <  1:41484/150‑1                                                                                         TCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCA                                                                                        >  1:171594/1‑150                                                                                                       GCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACC                                                                          >  2:311784/1‑150                                                                                                           CCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCC                                                                      >  2:101916/1‑150                                                                                                            CACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCC                                                                     <  2:171594/150‑1                                                                                                                            CCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATT                                                     <  1:311784/150‑1                                                                                                                                    CACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGAT                                             <  1:101916/150‑1                                                                                                                                                CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGG                                                                                                                     <  1:158886/66‑1                                                                                                                                                CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGG                                                                                                                     >  2:158886/1‑66                                                                                                                                                            GGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCT                     <  2:373782/150‑1                                                                                                                                                                             GCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTATTTTCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGA    <  1:474854/150‑1                                                                                                                                                                               CTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGT  <  2:428754/150‑1                                                                                                                                                                                                                                                                                                                                      GGCTGGTCGAGTCGGCGTTGATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1419727‑1419553 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGT  >  NC_002947/1419647‑1419795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.