New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	441138 =	21 (0.830)	5 (0.200)	5/268	2.4	20.1%	coding (16/1173 nt)	bioF	8‑amino‑7‑oxononanoate synthase
	?	NC_002947	441167 =	19 (0.760)					coding (45/1173 nt)	bioF	8‑amino‑7‑oxononanoate synthase

CGCGTGAAGAGCACGCCGACGAAGTGCACCAGGCAGCCATCGAGCAAGCGCTGGTCGAGCAGCGCAGCAGCGAGATGTTCTACGACGCCGCGACAGCCTGACATGGCTTTCGACCTGGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAGTGGTGGTCGACGGCCAGCGGTTGCTGGCCTTCTGCAGCAATGACTACCTGGGCCTGGCCAACCACCCCGAGGTGATCGCCGCCTGGCAGGCCGGCGCCGA  >  NC_002947/441021‑441316                                                                                                                                                   |                                                                                                                                                      gggtggttggccaggcccaggtagtcattgctgcagaaggccagcaaccgctggccgtcgaccaccacttccggcccttgcgggctttccagcaatggccgctgccgatacaggtctGCGGCGCGCCTGGCCGAACGGCGCGCCGCAGAc                                                                                                                                                    >  2:548157‑M1/118‑150 (MQ=255)    gTGAAGAGCACGCCGACGAAGTGCACCAGGCAGCCATCGAGCAAGCGCTGGTCGAGCAGCGCAGCAGCGAGATGTTCTACGACGCCGCGACAGCCTGACATGGCTTTCGACCTGGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTg                                                                                                                                                 >  2:89516/1‑150 (MQ=255)       aaGAGCACGCCGACGAAGTGCACCAGGCAGCCATCGAGCAAGCGCTGGTCGAGCAGCGCAGCAGCGAGATGTTCTACGACGCCGCGACAGCCTGACATGGCTTTCGACCTGGCAGCGCGCCTTTCCGAACGGCGCGCCGCAGACCTGTAt                                                                                                                                              >  1:468804/1‑150 (MQ=255)            cACGCCGACGAAGTGCACCAGGCAGCCATCGAGCAAGCGCTGGTCGAGCAGCGCAGCAGCGAGATGTTCTACGACGCCGCGACAGCCTGACATGGCTTTCGACCTGGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGTATCGGCa                                                                                                                                         >  2:193751/1‑150 (MQ=255)                  gacgaAGTGCACCAGGCAGCCATCGAGCAAGCGCTGGTCGAGCAGCGCAGCAGCGAGATGTTCTACGACGCCGCGACAGCCTGACATGGCTTTCGACCTGGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGTATCGGCAGCGGcc                                                                                                                                   >  1:480758/1‑150 (MQ=255)                        gTGCACCAGGCAGCCATCGAGCAAGCGCTGGTCGAGCAGCGCAGCAGCGAGATGTTCTACGACGCCGCGACAGCCTGACATGGCTTTCGACCTGGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGTATCGGCAGCGGCCATTGCt                                                                                                                             >  1:585265/1‑150 (MQ=255)                         tGCACCAGGCAGCCATCGAGCAAGCGCTGGTCGAGCAGCGCAGCAGCGAGATGTTCTACGACGCCGCGACAGCCTGACATGGCTTTCGACCTGGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGTATCGGCAGCGGCCATTGCTg                                                                                                                            <  1:89516/150‑1 (MQ=255)                                 gCAGCCATCGAGCAAGCGCTGGTCGAGCAGCGCAGCAGCGAGATGTTCTACGACGCCGCGACAGCCTGACATGGCTTTCGACCTGGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGccc                                                                                                                    <  1:226696/150‑1 (MQ=255)                                 gCAGCCATCGAGCAAGCGCTGGTCGAGCAGCGCAGCAGCGAGATGTTCTACGACGCCGCGACAGCCTGACATGGCTTTCGACCTGGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGTATCGGCAGCGGCCATTGCCGGAAAGccc                                                                                                                    <  2:468804/150‑1 (MQ=255)                                                    tGGTCGAGCAGCGCAGCAGCGAGATGTTCTACGACGCCGCGACAGCCTGACATGGCTTTCGACCTGGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAgtggtg                                                                                                 <  1:571174/150‑1 (MQ=255)                                                    tGGTCGAGCAGCGCAGCAGCGAGATGTTCTACGACGCCGCGACAGCCTGACATGGCTTTCGACCTGGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAgtggtg                                                                                                 <  1:219985/150‑1 (MQ=255)                                                       tCGAGCAGCGCAGCAGCGAGATGTTCTACGACGCCGCGACAGCCTGACATGGCTTTCGACCTGGCAGCGCGCCTGGCCGAACGGCGCGCCGAAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAGTGGTGGTc                                                                                              <  2:213059/150‑1 (MQ=255)                                                        cgtcgaccaccacttccggcccttgcgggctttccagcaatggccgctgccgatacaggtctGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGt                                                                                                                                                >  1:250415‑M1/63‑99 (MQ=255)                                                        cgtcgaccaccacttccggcccttgcgggctttccagcaatggccgctgccgatacaggtctGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGt                                                                                                                                                <  2:250415‑M1/37‑1 (MQ=255)                                                                            tGTTCTACGACGCCGCGACAGCCTGACATGGCTTTCGACCTGGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAGTGGTGGTCGACGGCCAGCGGTTGCTGGcc                                                                         <  2:529941/150‑1 (MQ=255)                                                                                    gacgCCGCGACAGCCTGACATGGCTTTCGATCTGGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAGTGGTGGTCGACGGCCAGCGGTTGCTGGCCTTCTgcag                                                                 >  1:174211/1‑150 (MQ=255)                                                                                                 ccTGACATGGCTTTCGACCTGGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAGTGGTGGTCGACGGCCAGCGGTTGCTGGCCTTCTGCAGCAATGACCACCTg                                                    >  2:593211/1‑150 (MQ=255)                                                                                                       aTGGCTTTCGACCTGGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAGTGGTGGTCGACGGCCAGCGGTTGCTGGCCTTCTGCAGCAATGACTACCTGGGCCTg                                              <  2:585265/150‑1 (MQ=255)                                                                                                            tttCGACCTGGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAGTGGTGGTCGACGGCCAGCGGTTGCTGGCCTTCTGCAGCAATGACTACCTGGGCCTGGCCaa                                         >  1:351311/1‑150 (MQ=255)                                                                                                              acaggtctgcggcgcgccgttcggccaggcgcgctgcAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAGTGGTGGTCGACg                                                                                          <  2:250415‑M2/62‑1 (MQ=255)                                                                                                              acaggtctgcggcgcgccgttcggccaggcgcgctgcAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAGTGGTGGTCGACg                                                                                          >  1:250415‑M2/38‑99 (MQ=255)                                                                                                                  gtctgcggcgcgccgttcggccaggcgcgccgcAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAGTGGTGGTCGACGGCCAGCGGTTGCTGGCCTTCTGCAGCAATGACTACCTGGGCCTGGCCAACCAccc                                   >  2:548157‑M2/34‑150 (MQ=255)                                                                                                                      gcggcgcgccgttcggccaggcgcgctgcAGACCTGTATCGGCAGCGGCCATTGCTGGaaa                                                                                                                        >  2:298028‑M2/30‑61 (MQ=255)                                                                                                                      gcggcgcgccgttcggccaggcgcgctgcAGACCTGTATCGGCAGCGGCCATTGCTGGaaa                                                                                                                        <  1:298028‑M2/32‑1 (MQ=255)                                                                                                                       CAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAGTGGTGGTCGACGGTCAGCGGTTGCTGGCCTTCTGCAGCAATGACTACCTGGGCCTGGCCAACCACCCCGAgg                              >  1:110547‑M1/1‑150 (MQ=255)                                                                                                                               cTGGCCGAACGGCGCGCCGCAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAGTGGTGGTCGACGGCCAGCGGTTGCTGGCCTTCTGCAGCAATGACTACCTGGGCCTGGCCAACCACCCCGAGGTGATcgcc                      >  2:143614/1‑150 (MQ=255)                                                                                                                                    cGAACGGCGCGCCGCAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAGTGGTGGTCGACGGCCAGCGGTTGCTGGCCTTCTGCAGCAATGACTACCTGGGCCTGGCCAACCACCCCGAGGTGATCGCCGCCTg                 >  2:482770/1‑150 (MQ=255)                                                                                                                                       caggCGCGCCGCAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAGTGGTGGTCGACGGCCAGCGGTTGCTGGCCTTCTGCAGCAATGACTACCTGGGCCTGGCCAACCACCCCGAGGTGATCGCCGCCTGGCa              <  1:548157/148‑1 (MQ=255)                                                                                                                                                   aGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAGTGGTGGTCGACGTCCAGCGGTTGCTGGCATTCCGCAGCAATGTTTCGCTCAACCTTTCCAGTGACCCCGAGGTGATCGCCGCCTGGCAGGCCGGCGCCGa  <  1:11832/150‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                      CGCGTGAAGAGCACGCCGACGAAGTGCACCAGGCAGCCATCGAGCAAGCGCTGGTCGAGCAGCGCAGCAGCGAGATGTTCTACGACGCCGCGACAGCCTGACATGGCTTTCGACCTGGCAGCGCGCCTGGCCGAACGGCGCGCCGCAGACCTGTATCGGCAGCGGCCATTGCTGGAAAGCCCGCAAGGGCCGGAAGTGGTGGTCGACGGCCAGCGGTTGCTGGCCTTCTGCAGCAATGACTACCTGGGCCTGGCCAACCACCCCGAGGTGATCGCCGCCTGGCAGGCCGGCGCCGA  >  NC_002947/441021‑441316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.