New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3464323	10 (0.390)	5 (0.240)	5/224	2.0	34.2%	coding (78/1929 nt)	PP_3078	ABC transporter substrate‑binding protein
	?	NC_002947	= 3464362	11 (0.530)					coding (39/1929 nt)	PP_3078	ABC transporter substrate‑binding protein

GGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCACGGTGTTGACCGGTGCGCTGAAGACCACGGT  >  NC_002947/3464215‑3464509                                                                                                                                                    |                                                                                                                                                    ggCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCtt                                                                                                                                                   >  2:385094‑M2/1‑148 (MQ=255)              aCCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCttcgcgggtaaac                                                                                                                                        <  1:609849‑M2/148‑14 (MQ=255)              aCCGTAAGGGCGTGGGCGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCttcgcgggtaaac                                                                                                                                        >  2:609849‑M2/1‑135 (MQ=255)              aCCGTAACGGCGCGGGTGGCCGCGCCCTAGCGAGTAAAGGCTATGCACGAAAAGACAAGCCCCCACAAGACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCttcgcgggtaaaccc                                                                                                                                      <  2:319331‑M2/150‑16 (MQ=255)                         gtgggtggGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAgg                                                                                                                           <  2:353710/150‑1 (MQ=255)                              tgggAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGc                                                                                                                      <  1:408291/150‑1 (MQ=255)                                              ggTAAAACCTATGCACGAAAATACAAGCCCCCACAATTCTTGGGGGAGCTGGTTTACCCGCTAATGCGTCGGAGCAAGCAACGAGGTTGCCTGGTCTAGCCTCTTCGCGAGTAAACCCGCTCTCACAGGGGGGCTGATCACCGGGAgggg                                                                                                      <  1:27697/149‑1 (MQ=255)                                                    gCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATc                                                                                                >  1:135463/1‑150 (MQ=255)                                                        aTGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTc                                                                                            >  1:564242/1‑150 (MQ=255)                                                                                                      cccGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCttcgcgggtaaacccgctcccacaagtattgtgggggcttgtattttcgtgcataggctttacggtccaggccgctcccacccacgcccttacggtctacggt                                              <  2:314729‑M2/150‑104 (MQ=255)                                                                                                       ccGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCttcgcgggtaaacccgctcccacaagtattgtgggggcttgtattttcgtgcataggctttacggtccaggccgctcccacccacgcccttacggtctacggtg                                             <  1:547496‑M2/150‑105 (MQ=255)                                                                                                       ccGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCa                                             >  2:175600/1‑150 (MQ=255)                                                                                                         gcgAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCttcgcgggtaaacccgctcccacaagtattgtgggggcttgtattttcgtgcataggctttacggtccaggccgctcccacccacgcccttacggtctacggtgaa                                           >  2:547496‑M2/1‑44 (MQ=255)                                                                                                                  tCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGc                                  >  1:154389/1‑150 (MQ=255)                                                                                                                  tCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGc                                  >  2:206028/1‑150 (MQ=255)                                                                                                                          ggCAACGAGGTTGTCTGGTCTGGCCTAttcgcgggtaaacccgctcccacaagtattgtggg                                                                                                                  >  1:89422‑M2/1‑27 (MQ=255)                                                                                                                          ggCAACGAGGTTGTCTGGTCTGGCCTAttcgcgggtaaacccgctcccacaagtattgtggg                                                                                                                  <  2:89422‑M2/62‑36 (MQ=255)                                                                                                                                              tggCCTCTTCGCGGGTAAACCCGCACCAACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGTACTGGGTCTTCACCGGGCCTTGCACGGTGTTGACCGGTGCGCTGAAGActa      >  2:384066/1‑148 (MQ=255)                                                                                                                                                gCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCAAGGTGTTGACCGGTGCGCTGAAGagaaag    >  1:71342/1‑145 (MQ=255)                                                                                                                                                  ctctTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCACGGTGTTGACCGGTGCGCTGAAGACCACGgt  <  1:319331/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCACGGTGTTGACCGGTGCGCTGAAGACCACGGT  >  NC_002947/3464215‑3464509

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.