| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 322,142 | 0 | T | C | 36.6% | 54.9 / 64.2 | 71 | intergenic (+427/+31) | aguA/PP_0267 | agmatine deiminase/ferric siderophore receptor |
| Reads supporting (aligned to +/- strand): ref base T (21/24); new base C (12/14); total (33/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.18e-02 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTGCTCAATGCCGCCCGCA > NC_002947/321994‑322291 | tGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTc < 1:1322113/150‑1 (MQ=255) ggAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTcg < 1:860887/150‑1 (MQ=255) gatgCATGAGGGCTAGGACGACCGACCCATGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGCCGCTCATGGCGGTTTGGCACTGCTCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCcgc < 1:327681/147‑1 (MQ=255) aGCATCAGGGTCAGGACGACCGACCCACGACGTCTTCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGa < 1:1310440/150‑1 (MQ=255) gCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGaa < 1:197006/150‑1 (MQ=255) aTCAGGGTCAGGACGACCGGCCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAag‑‑a < 1:851515/150‑1 (MQ=255) aTCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAag‑‑a > 1:1333319/1‑150 (MQ=255) aTCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAag‑‑a < 1:258588/150‑1 (MQ=255) aTCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAag‑‑a > 1:955463/1‑150 (MQ=255) tCAGGGTCAGGACGACCGACCCACGACGNNTGCTTGCCGGGCGANANCNCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAag‑‑ag > 1:825805/1‑150 (MQ=255) aGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAAG‑‑AGGc < 2:955463/150‑1 (MQ=255) ggTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCGGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAg < 2:669440/150‑1 (MQ=255) aGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAAG‑‑AGGCAgg > 2:182866/1‑147 (MQ=255) aGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAAG‑‑AGGCAgg < 1:182866/147‑1 (MQ=255) cACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTaaaa > 1:670345/1‑150 (MQ=255) tGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGaa < 2:25146/117‑1 (MQ=255) tGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGaa > 1:25146/1‑117 (MQ=255) cgCCGGGCGATACCCCAAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTACACCTGTACCTGCCTCTTCGCCGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAg < 2:825805/149‑1 (MQ=255) gggCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTAc < 2:1333319/150‑1 (MQ=255) ggCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTAcc > 2:628216/1‑150 (MQ=255) cccAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCa < 1:444609/105‑1 (MQ=255) cccAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCa > 2:444609/1‑105 (MQ=255) cccAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAag‑‑a < 2:853889/101‑1 (MQ=255) cccAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAag‑‑a > 1:853759/1‑101 (MQ=255) cccAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAag‑‑a > 1:853889/1‑101 (MQ=255) cccAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAag‑‑a < 2:853759/101‑1 (MQ=255) ccAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACcaca > 2:1129374/1‑150 (MQ=255) ccAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAAG‑‑AGGc < 1:655600/103‑1 (MQ=255) ccAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAAG‑‑AGGc > 2:655600/1‑103 (MQ=255) aaGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGCAGCCGGGCCAGT‑‑GGGGAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAg > 2:775723/1‑150 (MQ=255) ggTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCa > 2:763072/1‑120 (MQ=255) ggTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCa < 1:763072/120‑1 (MQ=255) aGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAgg > 2:1324226/1‑93 (MQ=255) aGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAgg < 1:1324226/93‑1 (MQ=255) gagaTGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTa < 1:333634/134‑1 (MQ=255) gagaTGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTa > 2:333634/1‑134 (MQ=255) cAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGACTACGCGGATCGCCCACCTGGATCt > 2:1038186/1‑150 (MQ=255) gcgcTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTgcg > 1:88618/1‑150 (MQ=255) aTCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTgtag > 1:1372858/1‑150 (MQ=255) tCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTaaaa > 2:791204/1‑67 (MQ=255) tCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTaaaa < 1:791204/67‑1 (MQ=255) aTTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTTCGCCGCACTGTTCGCCGATCTGTAGTAgg < 2:1410105/150‑1 (MQ=255) cTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTGACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGATCTGTAGTAGGTCTTGtt > 1:298506/1‑149 (MQ=255) tGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCa < 1:628216/150‑1 (MQ=255) tACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGc < 2:1372858/150‑1 (MQ=255) cTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTAcgc > 2:991071/1‑88 (MQ=255) cTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTAcgc < 1:991071/88‑1 (MQ=255) cTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGAt > 1:753443/1‑92 (MQ=255) cTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGAt < 2:753443/92‑1 (MQ=255) cTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAAt > 1:950365/1‑150 (MQ=255) cTGCCTCTTCGCGAGCATGCCCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCtt < 2:85713/141‑1 (MQ=255) cTGCCTCTTCGCGAGCATGCCCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCtt > 1:85713/1‑141 (MQ=255) cTGCCTCTTCGCGAGCATGCCCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAAt > 1:647625/1‑150 (MQ=255) tGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGa < 2:314435/90‑1 (MQ=255) tGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGa > 1:314435/1‑90 (MQ=255) ccTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGtt < 2:950365/150‑1 (MQ=255) ctctTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTc > 1:970277/1‑135 (MQ=255) ctctTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTc < 2:970277/135‑1 (MQ=255) ctctTCGCGAGCATGCCCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTgtagta > 2:560936/1‑131 (MQ=255) ctctTCGCGAGCATGCCCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTgtagta < 1:560936/131‑1 (MQ=255) tctTCGCGAGCATGCCCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTgta > 1:865076/1‑127 (MQ=255) tctTCGCGAGCATGCCCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTgta < 2:865076/127‑1 (MQ=255) tctTCGCGAGCATGCCCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCtt < 1:414780/136‑1 (MQ=255) tctTCGCGAGCATGCCCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCGACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCtt > 2:414780/1‑136 (MQ=255) ctTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTGCt < 2:670345/150‑1 (MQ=255) ttCGCGAGCATGCCCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGc > 2:1108972/1‑121 (MQ=255) ttCGCGAGCATGCCCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGc < 1:1108972/121‑1 (MQ=255) cgcgGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTCTCAGCAATGTTGCTCaa < 1:50665/150‑1 (MQ=255) gagggCCTGCCAGCGAAG‑‑TCGCAGGTACAGGCAACTTAAAATCAGAACCTGTAGCTACCCGTAACCACACGGAAACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCAGTAGTAGGTCTTGTCAGCAATGTTGCTCact < 2:298506/148‑3 (MQ=255) cgGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTGCTCAATg < 2:779730/150‑1 (MQ=255) aTGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTGCTCAATgccgcc > 2:446080/1‑150 (MQ=255) tCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTGCTCAATGCCGCCCGca > 2:371970/1‑150 (MQ=255) | TGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTGATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAG‑‑AGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTGCTCAATGCCGCCCGCA > NC_002947/321994‑322291 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |