| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5914213 = | 91 (1.570) | 20 (0.440) | 12/210 | 3.1 | 23.3% | intergenic (+49/+104) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| ? | NC_002947 | 5914309 = | 60 (1.320) | intergenic (+145/+8) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
GCGGCTGCCGGCGGCGCGGGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5914389‑5914213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcgggcgtgcccgcgaagagggcgGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTAGTCAGCAC > NC_002947/5914309‑5914451 GCGGCTGCCGGCGGCGCGGGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCG > 1:1363645/1‑150 CGGCGGCGCGGGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGG < 2:1144507/150‑1 CGGCGGCGCGGGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGG > 2:591081/1‑150 GGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCGGCCCTCTTCGCGGGCACGCTCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGGGTGCCCGCG < 2:944851/150‑1 CTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAA < 1:591081/150‑1 TTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAG > 2:1125267/1‑150 TTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAG > 2:1408274/1‑150 TTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGATACGAGCCATGCGTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAG > 2:416500/1‑150 CGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAG < 2:1363645/150‑1 CTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGG < 1:1274971/150‑1 CTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGAGGGCGTGCCCGCGAAGAGGG > 1:1021090/1‑150 CTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGG < 2:927312/141‑1 CTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGG > 1:927312/1‑141 TACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAA < 2:869965/136‑1 TACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAA > 1:869965/1‑136 GAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCG < 2:898351/102‑1 GAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCG > 1:898351/1‑102 ACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCG > 2:530594/1‑150 GCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAATAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCC > 1:338406/1‑150 GCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCC > 2:665378/1‑150 GCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCC < 1:727244/150‑1 GCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCCGGTAGTTGTACAGCGAAGCCCGCGCCGCC > 2:727244/1‑150 GCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATT < 2:698569/116‑1 GCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATT > 1:698569/1‑116 CCGCTCCCACAGGTAAGTCGCAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGG > 2:64131/1‑92 CCGCTCCCACAGGTAAGTCGCAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGG < 1:64131/92‑1 CCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGG > 2:932567/1‑150 CCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAA < 2:279339/69‑1 CCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAA > 1:279339/1‑69 TCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGC > 2:691949/1‑150 TCCCACAGGTAAGTAACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGC > 2:190070/1‑150 CCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTC > 1:1084940/1‑103 CCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTC < 2:1084940/103‑1 CCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGACCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTT < 2:1423181/120‑1 CCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGACCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTT > 1:1423181/1‑120 AGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGT < 2:261944/50‑1 AGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGT > 1:261944/1‑50 AGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTC > 2:1421227/1‑81 AGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTC < 1:1421227/81‑1 TTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGC < 1:1113780/43‑1 TTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGC > 2:1113780/1‑43 CCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAAC < 1:665378/150‑1 CCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAAC < 1:190070/150‑1 GGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAA < 1:718135/55‑1 GGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAA > 2:718135/1‑55 GGAGCGGGCGGGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGC < 2:505664/150‑1 GCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACGAGTGCGCAGTGC > 1:1208205/1‑150 GTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCTGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGC < 2:306809/150‑1 CCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCTCTCGCGGAACCAGTGCGCAGTGCGCGTA > 1:902940/1‑150 CCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTA < 1:691949/150‑1 CCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTAG > 2:1070950/1‑150 CCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTAG < 1:944851/150‑1 CCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTA < 2:43640/149‑1 CCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTA > 1:43640/1‑149 GCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTAGTC > 1:419054/1‑150 AGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCCGTGCGCAGTGGGCGTAGTAAGCA > 2:338548/1‑150 GAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTAGTCAGCAC > 2:901851/1‑150 GAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTAGTCAGCAC < 1:348182/150‑1 GCGGCTGCCGGCGGCGCGGGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5914389‑5914213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcgggcgtgcccgcgaagagggcgGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTAGTCAGCAC > NC_002947/5914309‑5914451 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |