| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 703039 = | 56 (0.970) | 16 (0.300) | 12/244 | 3.7 | 25.3% | intergenic (+33/‑226) | PP_5SD/PP_0598 | 5S ribosomal RNA/paraquat‑inducible protein A |
| ? | NC_002947 | 2553931 = | 43 (0.810) | intergenic (+19/‑132) | PP_5SF/PP_2240 | 5S ribosomal RNA/ABC transporter permease/ATP‑binding protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCGGGTAAACCCGCTCCTACAAATCATGAAATGTGCGTCATTTATAC > NC_002947/2553820‑2554077 | caccTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCaa > 2:1155108/1‑150 (MQ=32) accTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCaaa > 2:1447661/1‑150 (MQ=32) ccTGATCCCATCCACAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCaaaa > 1:51057/1‑150 (MQ=17) atcccatcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAAc < 1:846946/150‑1 (MQ=34) tcccatcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACt < 1:1155108/150‑1 (MQ=34) tcccatcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACt < 1:1364669/150‑1 (MQ=34) cccatcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTg < 1:1447661/150‑1 (MQ=34) catcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGa < 1:1238934/150‑1 (MQ=34) ccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTg < 1:93212/150‑1 (MQ=34) gccaCTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACACCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGc > 1:1025598/4‑150 (MQ=21) agtagtGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGGCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGAGATTGGCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATc > 1:391026/1‑150 (MQ=11) gtGAAACGATGCATCGCGGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTg > 2:762625/1‑150 (MQ=21) gATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGc < 2:1364678/150‑1 (MQ=34) aTCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGAGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGgaga < 2:489298/150‑1 (MQ=21) tCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCACGAAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCCCTGCGGGAGCGGCGAt > 1:398188/1‑150 (MQ=255) gATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCAc < 1:762625/150‑1 (MQ=34) gtgtGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGtt > 2:417797/1‑150 (MQ=34) tgtgGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTg < 2:671763/150‑1 (MQ=34) gggTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGc < 1:1129599/127‑1 (MQ=35) gggTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGc > 2:1129599/1‑127 (MQ=35) gggTTTCCCCATGTGAGAGTAGGTAATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCgg > 1:1311423/1‑150 (MQ=21) gTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGgaga < 2:1375793/130‑1 (MQ=35) gTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGgaga > 1:1375793/1‑130 (MQ=35) gTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGgt > 2:1306628/1‑149 (MQ=34) gTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGgt < 1:1306628/149‑1 (MQ=34) cccATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGAAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTcgc > 1:1201886/1‑150 (MQ=37) ccATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTcgcg < 1:417797/150‑1 (MQ=37) ccATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTcgcg > 2:358647/1‑150 (MQ=38) cATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCgg < 2:263651/150‑1 (MQ=38) cATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCgg < 1:690554/150‑1 (MQ=38) tCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCGGGTAAACCCGCTCCt > 2:528813/1‑150 (MQ=37) aTCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCGGGTAAACCCGCTCCTAc > 1:837074/1‑150 (MQ=37) aTCGTCAAGATTCAGTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCGGGTTTACCCGcgaacac < 2:398188/150‑7 (MQ=11) gTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCGGGTAAACCCGCTCCTACaaa < 1:358647/150‑1 (MQ=38) gTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGAGTTGCCGGTGTTCGCGGGTAAACCCGCTCCTACaaa < 1:531708/150‑1 (MQ=38) tCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCGGGTAAACCCGCTCCTACAAAt > 2:716847/1‑150 (MQ=38) tCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCGGGTAAACCCGCTCCTACAAAt < 2:837074/150‑1 (MQ=39) aGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCGGGTAAACCCGCTCCTACAAATCAt > 2:824239/1‑150 (MQ=255) ttCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCGGGTAAACCCGCTCCTACAAATCAAGaa < 2:215745/150‑1 (MQ=255) tttCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCGGGTAAACCCGCTCCTACAAATCATGAAAtgt > 1:1014951/1‑150 (MQ=255) gCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGc < 2:374425/99‑1 (MQ=37) gCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGc > 1:374425/1‑99 (MQ=37) gCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCGGGTAAACCCGCTCCTACAAATCATGAAATGTGCGt > 2:1004324/1‑150 (MQ=255) cccTATCTGCGCATGCAGGTAGGGGTTTGGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCGGGTAAACCCGCTCCTACAAATCATGAAATGTGCGTCATTtat > 1:1311429/1‑150 (MQ=255) ccTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCGGGTAAACCCGCTCCTACAAATCATGAAATGTGCGTCATTtata < 1:433588/150‑1 (MQ=255) cTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCGGGTAAACCCGCTCCTACAAATCATGAAATGTGCGTCATTTATAc > 2:280277/1‑150 (MQ=255) cTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCGGGTAAACCCGCTCCTACAAATCATGAAATGTGCGTCATTTATAc > 1:363862/1‑150 (MQ=255) | CACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTCGCGGGTAAACCCGCTCCTACAAATCATGAAATGTGCGTCATTTATAC > NC_002947/2553820‑2554077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |