| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,541,352 | Δ1 bp | 7.4% | coding (422/807 nt) | PP_3128 → | exopolysaccharide biosynthesis/transport protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,541,352 | 0 | A | . | 7.4% | 295.8 / 17.0 | 95 | coding (422/807 nt) | PP_3128 | exopolysaccharide biosynthesis/transport protein |
| Reads supporting (aligned to +/- strand): ref base A (39/49); new base . (3/4); total (42/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.78e-01 | |||||||||||
TCACCTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAGGTGAACAACCT > NC_002947/3541205‑3541499 | tCACCTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGc < 2:1570254/150‑1 (MQ=255) aCCTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAg > 1:1149091/1‑150 (MQ=255) aCCTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAg < 2:930717/150‑1 (MQ=255) ccTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAgg < 1:1448427/150‑1 (MQ=255) cTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGCTCCATGG‑GCAGGc < 2:1588005/150‑1 (MQ=255) cTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGc > 1:1955302/1‑150 (MQ=255) cGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGCTCCATGG‑GCAGGccc < 1:1576899/150‑3 (MQ=255) cGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGCTCCATGG‑GCAGGccc < 2:373524/150‑3 (MQ=255) aaCGCCGGAAGCGTGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGaa > 1:577344/1‑150 (MQ=255) aaCGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGaa < 1:2155500/150‑1 (MQ=255) aaCGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGaa < 2:110931/150‑1 (MQ=255) aaCGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGaa > 1:1270199/1‑150 (MQ=255) aCGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAAc < 2:2079175/150‑1 (MQ=255) ccGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAg < 2:1536225/150‑1 (MQ=255) cGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGt < 2:29768/150‑1 (MQ=255) cGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGa < 2:933773/150‑1 (MQ=255) gggCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGAc > 1:1609991/1‑150 (MQ=255) ggCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACg > 1:2081538/1‑150 (MQ=255) cAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCTCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGa < 1:476479/150‑1 (MQ=255) gACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACaa > 1:1302186/1‑150 (MQ=255) cATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGc > 2:246488/1‑150 (MQ=255) tGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCg > 2:1613002/1‑150 (MQ=255) gCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGa < 2:1955302/150‑1 (MQ=255) tGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGt < 2:1270199/150‑1 (MQ=255) ggCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGtt < 1:1173180/150‑1 (MQ=255) gATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCa > 2:2440748/1‑150 (MQ=255) gATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCa < 1:246488/150‑1 (MQ=255) gATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCa < 2:1302186/150‑1 (MQ=255) aTCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTCCATGGGACTTC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCAGAGTTGCAg < 2:211586/150‑1 (MQ=255) aTCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAg < 1:85154/150‑1 (MQ=255) tGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGcc < 2:1149091/150‑1 (MQ=255) gCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTg < 2:198391/150‑1 (MQ=255) aTGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTc > 2:545550/1‑150 (MQ=255) gAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGCTCCATGG‑GCAgg > 1:163293/1‑98 (MQ=255) gAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGCTCCATGG‑GCAgg < 2:163293/98‑1 (MQ=255) aGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAAc < 2:317061/150‑1 (MQ=255) tATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAAccc > 1:115921/1‑150 (MQ=255) cccACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTgg < 2:596411/138‑1 (MQ=255) cccACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCt > 1:1903602/1‑150 (MQ=255) cccACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCt > 1:654305/1‑150 (MQ=255) cccACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGCCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTgg > 1:596411/1‑138 (MQ=255) ccaccaAAACACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCtt > 2:1909665/1‑150 (MQ=255) accacaccacCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGc > 1:566831/1‑150 (MQ=255) accaccAAGACTGCGTTACTGGGGGCCTTCGACCTACGCCGGCCCAAGGTCAGCAGTTAGCTGGGCCTGC‑CCGTAGAGCAAAGACTGAACCGGGTTCTGACGGACAAGTCCGAGTTGCAGGACTGCCTGGGCAAGCCGACCTTGCCccgc > 2:1002039/1‑150 (MQ=255) aCTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCgtggtg > 1:1836839/1‑150 (MQ=255) aCTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCgtggtg > 1:1836692/1‑150 (MQ=255) tGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGtgct > 2:2445207/1‑150 (MQ=255) tGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGtgct < 2:654305/150‑1 (MQ=255) gTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAAc > 2:1504553/1‑121 (MQ=255) gTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAAc < 1:1504553/121‑1 (MQ=255) gtggACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAg < 2:345279/99‑1 (MQ=255) gtggACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAg > 1:345279/1‑99 (MQ=255) gtggACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCgg < 1:2445207/150‑1 (MQ=255) aCTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGAAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTAc < 2:1306330/150‑1 (MQ=255) cTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCgtg < 1:167699/130‑1 (MQ=255) cTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCgtg > 2:167699/1‑130 (MQ=255) ttCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTAccc > 2:1309125/1‑150 (MQ=255) ttCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTAccc < 1:844498/150‑1 (MQ=255) aCCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGc < 1:545550/150‑1 (MQ=255) aCCCGCGCCGGCCCAAGGTCGGCAGCGACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACCAGTTTCTGCCGGACAAGGCCGAGTTGCAGGCCGGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACTCCTGc < 2:457826/150‑1 (MQ=255) cTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTGTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACTCGGGTACCCGTTccc > 2:1323082/1‑150 (MQ=255) cTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGccc > 2:531714/1‑150 (MQ=255) cTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGccc < 1:2440748/150‑1 (MQ=255) cTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGccc > 1:1144304/1‑150 (MQ=255) cgcCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTg < 2:2081538/150‑1 (MQ=255) cgcCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTg < 1:546102/150‑1 (MQ=255) gcCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGtgc > 1:951185/1‑123 (MQ=255) gcCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGtgc < 2:951185/123‑1 (MQ=255) ccGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTc < 1:1909665/150‑1 (MQ=255) cccAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGTCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGAcc > 2:2056152/1‑150 (MQ=255) cAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGc > 1:1343956/1‑101 (MQ=255) cAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGc < 2:1343956/101‑1 (MQ=255) aGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCgaga > 2:850234/1‑150 (MQ=255) tCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGc > 2:647553/1‑150 (MQ=255) ggCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGACCGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTg < 1:1309125/150‑1 (MQ=255) gCAGTTCCCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGt < 1:1298871/150‑1 (MQ=255) gCAGTTACCTGGGCCTGC‑TTATGTAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGt < 1:1305558/150‑1 (MQ=255) ttACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTc < 2:861065/150‑1 (MQ=255) ccTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGcc > 2:1395692/1‑150 (MQ=255) tgCCTGCTCCATGG‑GCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAg > 2:387344/2‑150 (MQ=255) ggCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAg < 2:566831/150‑1 (MQ=255) gCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGcc < 2:229443/100‑1 (MQ=255) gCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGcc > 1:229443/1‑100 (MQ=255) cctgctccATGG‑GCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAGGt > 2:353906/7‑150 (MQ=255) ccTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAg > 1:825566/1‑148 (MQ=255) ccTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAg < 2:825566/148‑1 (MQ=255) ccTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAGGt < 2:1144304/150‑1 (MQ=255) cTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCgg > 1:329475/1‑105 (MQ=255) cTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCgg < 2:329475/105‑1 (MQ=255) tGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGt < 1:160454/64‑1 (MQ=255) tGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGt > 2:160454/1‑64 (MQ=255) ccATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAGGTGaaca > 2:963904/1‑150 (MQ=255) aTGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAGGTGaacaac < 2:639108/150‑1 (MQ=255) ggAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAGGTGAACAACCt < 1:963904/150‑1 (MQ=255) ggAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGCATTCCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAGGTGAACAACCt < 1:25092/150‑1 (MQ=255) | TCACCTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAGGTGAACAACCT > NC_002947/3541205‑3541499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |