Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,610,313 Δ1 bp 7.1% intergenic (‑38/+18) PP_3183 ← / ← mcoA SCO1/SenC family protein/Mn(II) copper oxidase A

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,610,3130G. 7.1% 264.7 / 13.4 84intergenic (‑38/+18)PP_3183/mcoASCO1/SenC family protein/Mn(II) copper oxidase A
Reads supporting (aligned to +/- strand):  ref base G (39/39);  new base . (3/3);  total (42/42)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

CCAGGGAGAGGCCGCTGCTTCGGCCACCGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCGGTGGTGGTCACCGCTACCCGCCAACGGGCCCCCGTAGTCGTGGCA  >  NC_002947/3610165‑3610460
                                                                                                                                                     |                                                                                                                                                   
ccAGGGAGAGGCCGCTGCTTCGGCCACCGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATgg                                                                                                                                                    >  1:2307764/1‑150 (MQ=255)
 cAGGGAGAGGCCGCTGCTTCGGCCACCGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATggc                                                                                                                                                   <  1:904502/150‑1 (MQ=255)
     gagaGGCCGCTGCTTCGGCCACCGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACCACAGTACCAGCAGGAATCGCGATGCGCCAAGAGAGAGGCGGTGCTCGTGGGTTGGCTGATGTGGGCCGCATGGCGGcc                                                                                                                                               >  1:1984582/1‑150 (MQ=255)
       gagGCCGCTGCTTCGGCCACCGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCCATGCGGcccc                                                                                                                                             <  1:2040623/150‑1 (MQ=255)
        agGCCGCTGCTTCGGCCACCGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCCATGCGGccccc                                                                                                                                            <  1:320088/150‑2 (MQ=255)
          gCCGCTGCTTCGGCCACCGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCt                                                                                                                                          >  2:2159667/1‑150 (MQ=255)
           ccGCTGCTTCGGCCACCGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCtt                                                                                                                                         <  2:1584042/150‑1 (MQ=255)
            cGCTGCTTCGGCCACCGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCttt                                                                                                                                        <  1:673578/150‑1 (MQ=255)
             gctgctTCGGCCACCGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTg                                                                                                                                       >  2:1389463/1‑150 (MQ=255)
              ctgctTCGGCCACCGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCttt                                                                                                                                        >  1:1257468/1‑148 (MQ=255)
              ctgctTCGGCCACCGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCCGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCCGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCttt                                                                                                                                        <  2:1257468/148‑1 (MQ=255)
                gctTCGGCCACCGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGcac                                                                                                                                    >  1:134257/1‑150 (MQ=255)
                gctTCGGCCACCGGTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAAGCGCTATGAGCCGTGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGGGGGCCCGCTTTGcac                                                                                                                                    <  2:953403/150‑1 (MQ=255)
                        cACCGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCCATGCGGcccccatca                                                                                                                                        <  2:1517726/138‑6 (MQ=255)
                        cACCGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCCATGCGGcccccatca                                                                                                                                        >  1:1517726/1‑133 (MQ=255)
                        cACCGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGt                                                                                                                            >  1:341967/1‑150 (MQ=255)
                          ccGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTAt                                                                                                                          <  2:2307764/150‑1 (MQ=255)
                          ccGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTAt                                                                                                                          <  2:134257/150‑1 (MQ=255)
                             ttcgttGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCACAGCTTTGCAGTTACTTGTAtgtg                                                                                                                       >  2:733893/1‑150 (MQ=255)
                                 ttGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTg                                                                                                                   <  2:341967/150‑1 (MQ=255)
                                 ttGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGAGGGCTTTGTGCACTCACTTGTATGTGACTg                                                                                                                   >  1:603007/1‑150 (MQ=255)
                                 ttGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCAAGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTg                                                                                                                   >  2:172509/1‑150 (MQ=255)
                                  tGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTgg                                                                                                                  <  1:1303408/150‑1 (MQ=255)
                                    gggTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGgcg                                                                                                                <  1:1777677/150‑1 (MQ=255)
                                    gggTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGgcg                                                                                                                <  1:1389463/150‑1 (MQ=255)
                                      gTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCt                                                                                                              <  1:733893/150‑1 (MQ=255)
                                          cAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCtt                                                                                                                                         >  2:668256/1‑119 (MQ=255)
                                          cAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCtt                                                                                                                                         <  1:668256/119‑1 (MQ=255)
                                           aaCGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCAc                                                                                                         >  1:2005470/1‑150 (MQ=255)
                                           aaCGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCAc                                                                                                         >  2:341826/1‑150 (MQ=255)
                                            aCGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCAcc                                                                                                        <  2:1712334/150‑1 (MQ=255)
                                            aCGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCAcc                                                                                                        >  2:1927783/1‑150 (MQ=255)
                                                 cAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTg                                                                                                   >  2:1705204/1‑150 (MQ=255)
                                                 cAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTg                                                                                                   >  2:2001607/1‑150 (MQ=255)
                                                  aGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGAGCGTCAGTCCAGAACGTCCTCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTgg                                                                                                  >  1:1861646/1‑150 (MQ=255)
                                                      cGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCa                                                                                              >  2:2038981/1‑150 (MQ=255)
                                                          aTGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGt                                                                                          <  2:542217/150‑1 (MQ=255)
                                                             cTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGGCTGGCCCAGCGTCGa                                                                                       >  1:2150459/1‑150 (MQ=255)
                                                              tGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGAt                                                                                      <  2:595353/150‑1 (MQ=255)
                                                              tGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATCGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACATCCACTGTCACCGTCTCGCCCAGCGTCGAt                                                                                      >  1:2342235/1‑150 (MQ=255)
                                                                  ggcgAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCa                                                                                  >  1:1196047/1‑150 (MQ=255)
                                                                     gAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGa                                                                                       <  2:1567844/142‑1 (MQ=255)
                                                                     gAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGa                                                                                       >  1:1567844/1‑142 (MQ=255)
                                                                         aacGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGAc                                                                           >  2:2145354/1‑150 (MQ=255)
                                                                         aacGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGAc                                                                           >  2:611373/1‑150 (MQ=255)
                                                                         aacGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCCTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGAc                                                                           >  2:1046853/1‑150 (MQ=255)
                                                                              cAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCATGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCg                                                                      <  1:377085/150‑1 (MQ=255)
                                                                               aGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGc                                                                     <  1:1220881/150‑1 (MQ=255)
                                                                                     agcagGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGt                                                               >  1:2066894/1‑150 (MQ=255)
                                                                                      gcagGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTg                                                              <  2:1984582/150‑1 (MQ=255)
                                                                                      gcagGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACCTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTg                                                              >  2:287477/1‑150 (MQ=255)
                                                                                         ggAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGcc                                                           >  1:2156177/1‑150 (MQ=255)
                                                                                          gAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCg                                                          <  1:2159667/150‑1 (MQ=255)
                                                                                           aaTCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCgg                                                         <  1:522030/150‑1 (MQ=255)
                                                                                             tCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGc                                                       >  1:225690/1‑150 (MQ=255)
                                                                                             tCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGc                                                       <  1:2038981/150‑1 (MQ=255)
                                                                                               gCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGCGACTGGCGCTGTCGCCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCa                                                     >  2:1305843/1‑150 (MQ=255)
                                                                                                ccATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCaa                                                    >  1:386594/1‑150 (MQ=255)
                                                                                                  aTGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAg                                                  <  2:2156177/150‑1 (MQ=255)
                                                                                                      gCCGGGCAAGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCgg                                              <  1:172509/150‑1 (MQ=255)
                                                                                                       ccGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCggt                                             <  2:1861646/150‑1 (MQ=255)
                                                                                                        cGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCAGGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCggtg                                            <  1:1569283/150‑1 (MQ=255)
                                                                                                          ggCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCAGTCCCTTGGATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCACTTGCGTGGCCGGGACAAAGCCggtggt                                          >  2:802789/1‑150 (MQ=255)
                                                                                                          ggCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCggtggt                                          >  1:804025/1‑150 (MQ=255)
                                                                                                           gCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCggtggtg                                         <  2:2005470/150‑1 (MQ=255)
                                                                                                           gCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCggtggtg                                         <  2:464540/150‑1 (MQ=255)
                                                                                                           gCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCggtggtg                                         <  1:341826/150‑1 (MQ=255)
                                                                                                           gCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTAGCTGGCGTGGCCGGGCCAAAGCCggtggtg                                         <  1:1025829/150‑1 (MQ=255)
                                                                                                                   cGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCGGTGGTGGTCACCGc                                 <  2:2087606/150‑1 (MQ=255)
                                                                                                                      tCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCGGTGGTGGTCACCGCTAc                              >  2:1597155/1‑150 (MQ=255)
                                                                                                                               gTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACCGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCgg                                              >  1:1362051/1‑125 (MQ=255)
                                                                                                                               gTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACCGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCgg                                              <  2:1362051/125‑1 (MQ=255)
                                                                                                                                ttGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCGGTGGTGGTCACCGCTACCCGCCAACgg                    >  1:1783879/1‑150 (MQ=255)
                                                                                                                                ttGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCGGTGGTGGTCACCGCTACCCGCCAACgg                    >  1:34316/1‑150 (MQ=255)
                                                                                                                                     tGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGt                                                                                                            >  2:841846/1‑57 (MQ=255)
                                                                                                                                     tGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGt                                                                                                            <  1:841846/57‑1 (MQ=255)
                                                                                                                                     tGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCgg                                                         <  1:1502039/108‑1 (MQ=255)
                                                                                                                                     tGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCgg                                                         >  2:1502039/1‑108 (MQ=255)
                                                                                                                                       agcggggCCGCCATGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCGGTGGTGGTCACCGCTACCCGCCAACGGGCCCCCg             >  1:682791/4‑150 (MQ=255)
                                                                                                                                       aTGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCGGTGGTGGTCACCGCTACCCGCCAACGGGCCCCCg             <  2:225690/150‑1 (MQ=255)
                                                                                                                                        gcggggCCGCCATGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCGGTGGTGGTCACCGCTACCCGCCAACGGGCCCCCGt            >  2:1427121/3‑150 (MQ=255)
                                                                                                                                           gggCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCGGTGGTGGTCACCGCTACCCGCCAACGGGCCCCCGTAGt         <  2:2066894/150‑1 (MQ=255)
                                                                                                                                             gCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCGGTGGTGGTCACCGCTACCCGCCAACGGGCCCCCGTAGTCg       <  1:1705204/150‑1 (MQ=255)
                                                                                                                                              ccGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCGGTGGTGGTCACCGCTACCCGCCAACGGGCCCCCGTAGTCGt      <  2:1783879/150‑1 (MQ=255)
                                                                                                                                                gCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCGGTGGTGGTCACCGCTACCCGCCAACGGGCCCCCGTAGTCGTgg    <  1:2145354/150‑1 (MQ=255)
                                                                                                                                                   aTGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGGCGCGCGTCGATTTCACCGTTACCTTCGCTGGCGTGGCCGGGCCAAAGCCGGTGGTGGTCACCGCTACCCGCCAACGGGCCCCCGTAGTCGTGGCa  >  1:2124882/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CCAGGGAGAGGCCGCTGCTTCGGCCACCGTTCGTTGGGGTTGCAACGGCCAGAACGGAATGCTGGCGGCGAACAACGCCAGTACCAGCAGGAATCGCCATGAGCCGGGCATGATGCGGTCCTCGTGGGTTGGCTGATGGGGGCCGCATGGCGGCCCCGCTTTGCACTCACTTGTATGTGACTGGCGCTGTCACCGTCTGGCCCAGCGTCGATTTCACCGTGACCGTCGCTGGCGTGGCCGGGCCAAAGCCGGTGGTGGTCACCGCTACCCGCCAACGGGCCCCCGTAGTCGTGGCA  >  NC_002947/3610165‑3610460

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: