Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,424,538 Δ1 bp 6.8% coding (89/915 nt) PP_4764 → histone deacetylase family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,424,5380A. 6.8% 437.1 / 26.0 146coding (89/915 nt)PP_4764histone deacetylase family protein
Reads supporting (aligned to +/- strand):  ref base A (75/61);  new base . (4/6);  total (79/67)
Fisher's exact test for biased strand distribution p-value = 5.13e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.54e-01

Only 100 of 146 total aligned reads displayed.

TCCCATTGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTGTCGCGCGAGGACCAGCGCC  >  NC_002947/5424391‑5424684
                                                                                                                                                    |                                                                                                                                                   
tCCCATTGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCAcc                                                                                                                                                   >  2:356663/1‑149 (MQ=255)
tCCCATTGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCAGCGCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACg                                                                                                                                                   >  1:1983685/1‑150 (MQ=255)
 cccATTGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGa                                                                                                                                                  >  1:2125147/1‑150 (MQ=255)
  ccATTGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGac                                                                                                                                                 <  2:2125147/150‑1 (MQ=255)
  ccATTGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGac                                                                                                                                                 <  2:2125165/150‑1 (MQ=255)
   cATTGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGacc                                                                                                                                                >  2:2271153/1‑150 (MQ=255)
      tGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACCAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGaccacc                                                                                                                                             >  2:1381792/1‑150 (MQ=255)
       gCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCt                                                                                                                                            <  2:36400/150‑1 (MQ=255)
        cAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTg                                                                                                                                           >  1:284003/1‑150 (MQ=255)
         aGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCTCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTgg                                                                                                                                          <  2:597814/150‑1 (MQ=255)
           tCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTc                                                                                                                                        >  1:1393827/1‑150 (MQ=255)
           tCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTc                                                                                                                                        <  1:2439650/150‑1 (MQ=255)
             aCCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCg‑g                                                                                                                                     <  2:307365/150‑1 (MQ=255)
               ccGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCTGATCTGGTACCTC‑TCCCGATGGACAAGTTCCGCCTGCTGC‑CGACCAGGTGGTCgtgca                                                                                                                                   >  2:1242099/1‑146 (MQ=255)
               ccGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAA‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCa                                                                                                                                   >  2:1544738/1‑150 (MQ=255)
                cGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTGTGCCTGCTGC‑CGACCAGGTGGTCgtgcag                                                                                                                                  <  1:1242099/150‑6 (MQ=255)
                 gTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCAATTCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGc                                                                                                                                 <  1:2231529/150‑1 (MQ=255)
                  tCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCCGCTGC‑CGACCAGGTGGTCGTGCAGca                                                                                                                                <  1:2116403/150‑2 (MQ=255)
                   cATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCgg                                                                                                                               <  2:103409/150‑1 (MQ=255)
                    aTGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGNggg                                                                                                                              <  2:1514765/150‑1 (MQ=255)
                      ggCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGaccacc                                                                                                                                             <  2:255938/134‑1 (MQ=255)
                       gCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTg                                                                                                                           >  1:1895633/1‑150 (MQ=255)
                         aaGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGac                                                                                                                         <  2:2059484/150‑1 (MQ=255)
                            aTCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCa                                                                                                                                   >  1:2003018/1‑137 (MQ=255)
                            aTCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGaccac                                                                                                                      <  1:2271153/150‑1 (MQ=255)
                               aGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCCGCTGC‑CGACCAGGTGGTCGTGCAGCAGGcg                                                                                                                            <  2:621993/141‑2 (MQ=38)
                                   cTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAg                                                                                                               <  2:1767827/150‑1 (MQ=255)
                                   cTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCCGACCACCGACCAg                                                                                                               <  2:1983685/150‑1 (MQ=255)
                                      gCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATGACAGCGAGGCGTTCCCGAGGCAAC‑AAAGCTGCCGGGCGGACATGTGCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGAACACCTACCAGGcc                                                                                                            >  1:768220/1‑150 (MQ=255)
                                       cccTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGccc                                                                                                           <  1:1531111/150‑1 (MQ=255)
                                         cTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTc                                                                                                                                        >  1:221173/1‑120 (MQ=255)
                                         cTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTc                                                                                                                                        <  2:221173/120‑1 (MQ=255)
                                          tGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCctgc                                                                                                        >  1:386887/1‑150 (MQ=255)
                                                 gACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGccc                                                                                                 >  1:863938/1‑150 (MQ=255)
                                                  aCCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTgcgacgc                                                                                                <  1:2301562/150‑5 (MQ=255)
                                                   ccccATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCgg                                                                                               >  2:1359397/1‑150 (MQ=255)
                                                    cccATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGa                                                                                                                          <  1:1590403/122‑1 (MQ=255)
                                                    cccATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGa                                                                                                                          >  2:1590403/1‑122 (MQ=255)
                                                     ccatccatGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCCGCTGC‑CGaccagg                                                                                                                                             <  1:1158456/102‑3 (MQ=255)
                                                     ccatccatGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCCGCTGC‑CGaccagg                                                                                                                                             >  2:1158456/1‑100 (MQ=255)
                                                      catccatGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGacca                                                                                                                                               <  1:1382899/100‑1 (MQ=255)
                                                       atccatGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACAt                                                                                           <  2:284003/150‑1 (MQ=255)
                                                       atccatGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCACCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACAt                                                                                           >  1:1841260/1‑150 (MQ=255)
                                                           atGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGc                                                                                       <  1:1359397/150‑1 (MQ=255)
                                                               cGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCa                                                                                   >  1:1237369/1‑150 (MQ=255)
                                                                   gCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGa                                                                               <  2:1895633/150‑1 (MQ=255)
                                                                      gCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCggg                                                                                                                              >  1:298040/1‑100 (MQ=255)
                                                                      gCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGaaa                                                                             <  1:912897/149‑3 (MQ=255)
                                                                      gCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACAt                                                                            >  2:2095696/1‑150 (MQ=255)
                                                                             tACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGAc                                                                                                                  >  1:1030134/1‑105 (MQ=255)
                                                                             tACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGcc                                                                     >  2:2015948/1‑150 (MQ=255)
                                                                              aCCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGccc                                                                    >  1:1376380/1‑150 (MQ=255)
                                                                                cACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTg                                                                  <  1:2015948/150‑1 (MQ=255)
                                                                                 aCGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTgg                                                                 >  2:1814400/1‑150 (MQ=255)
                                                                                 aCGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTgg                                                                 >  1:2185046/1‑150 (MQ=255)
                                                                                        ttACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGa                                                          <  2:863938/150‑1 (MQ=255)
                                                                                         tACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGAc                                                         >  2:2282468/1‑150 (MQ=255)
                                                                                           cAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCggg                                                                                                                              >  1:2120449/1‑79 (MQ=255)
                                                                                             gCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCCGCTGC‑CGACCAGGTGGTCGTGCAGCAGGc                                                                                                                             <  1:390254/78‑1 (MQ=18)
                                                                                             gCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCCGCTGC‑CGACCAGGTGGTCGTGCAGCAGGc                                                                                                                             >  2:390254/1‑78 (MQ=18)
                                                                                              cccNGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCAAACGACATCCTCGCCCTGGCCCATGACCGCAg                                                    >  2:1497357/1‑150 (MQ=255)
                                                                                               ccGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGc                                                                                       >  1:883653/1‑114 (MQ=255)
                                                                                               ccGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGc                                                                                       <  2:883653/114‑1 (MQ=255)
                                                                                               ccGGAGTTCCCCGCTGAAA‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGc                                                   <  1:1544738/150‑1 (MQ=255)
                                                                                                        cccGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGcc                                                                                                  >  2:2001317/1‑94 (MQ=255)
                                                                                                        cccGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAg                                          >  1:1683613/1‑150 (MQ=255)
                                                                                                         ccGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGc                                                                <  2:192774/127‑1 (MQ=255)
                                                                                                         ccGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCa                                                     <  1:509601/138‑1 (MQ=255)
                                                                                                         ccGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCa                                                     >  2:509601/1‑138 (MQ=255)
                                                                                                         ccGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAgc                                         >  1:1031946/1‑150 (MQ=255)
                                                                                                          cGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAgcg                                        >  2:1709491/1‑150 (MQ=255)
                                                                                                          cGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAgcg                                        >  2:1444174/1‑150 (MQ=255)
                                                                                                           gCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAgcgc                                       <  2:1376380/150‑1 (MQ=255)
                                                                                                            cTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCt                                      >  1:112834/1‑150 (MQ=255)
                                                                                                            cTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCt                                      <  2:1393827/150‑1 (MQ=255)
                                                                                                                 c‑acCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATg                                 >  2:973543/1‑150 (MQ=255)
                                                                                                                   acCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAAc                                                                                 <  2:106455/101‑1 (MQ=255)
                                                                                                                   acCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAAc                                                                                 >  1:106455/1‑101 (MQ=255)
                                                                                                                       cTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACgg                            <  1:1804468/150‑1 (MQ=255)
                                                                                                                        ttCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGc                           <  2:386887/150‑1 (MQ=255)
                                                                                                                           ccGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAg                        <  2:528205/150‑1 (MQ=255)
                                                                                                                            cGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGc                                                                >  2:1812499/1‑109 (MQ=255)
                                                                                                                            cGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGc                                                                <  1:1812499/109‑1 (MQ=255)
                                                                                                                             gATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCAt                                                            <  2:2342703/112‑1 (MQ=255)
                                                                                                                             gATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCAt                                                            >  1:2342703/1‑112 (MQ=255)
                                                                                                                                  aCAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTGTcgc                 >  2:1581875/1‑150 (MQ=255)
                                                                                                                                   cAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCCACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCCGTcgcg                >  2:282297/1‑150 (MQ=255)
                                                                                                                                    aaGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGAACGACAATACATCGAGCGCTACATGAACGGCGAGCTGTcgcgc               >  2:1773948/1‑150 (MQ=255)
                                                                                                                                       ttCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCGATGACGTCGAGCGCTACATGAACGGCGAGCTGTCGCGCGAg            >  1:22856/1‑150 (MQ=255)
                                                                                                                                       ttCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTg                     >  1:1967883/1‑141 (MQ=255)
                                                                                                                                       ttCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTGTCGCGCGAg            <  2:1072261/150‑1 (MQ=255)
                                                                                                                                       ttCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTGTCGCGCGAg            >  1:972684/1‑150 (MQ=255)
                                                                                                                                         ccGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACa                                   <  2:1664040/125‑1 (MQ=255)
                                                                                                                                         atgCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACa                                   >  1:1664040/3‑125 (MQ=255)
                                                                                                                                          cGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACAGGAACGGCGATCTGTCGAGGGCGGAc         >  2:1084258/1‑150 (MQ=255)
                                                                                                                                                ctgcACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTGTCGCGCGAGGACCAgcgc   <  1:605316/150‑1 (MQ=255)
                                                                                                                                                ctgcACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACAACCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTGTCGCGCGAGGACCAgcgc   <  1:765723/150‑1 (MQ=255)
                                                                                                                                                 tgcACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGa                         <  2:2225913/127‑1 (MQ=255)
                                                                                                                                                 tgcACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTGTCGCGCGAGGACCAgcgtc  >  2:986333/1‑148 (MQ=255)
                                                                                                                                                   cACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCg                                                       <  1:420836/95‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TCCCATTGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTGTCGCGCGAGGACCAGCGCC  >  NC_002947/5424391‑5424684

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑