Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,867,794 Δ1 bp 5.8% intergenic (‑33/+19) thyA ← / ← lgt thymidylate synthase/prolipoprotein diacylglyceryl transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,867,7940G. 5.8% 330.7 / 14.0 104intergenic (‑33/+19)thyA/lgtthymidylate synthase/prolipoprotein diacylglyceryl transferase
Reads supporting (aligned to +/- strand):  ref base G (48/50);  new base . (3/3);  total (51/53)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.27e-01

Only 100 of 106 total aligned reads displayed.

GCAGGTCGAAACGCAGCATCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAACCGAGTTGTGCAT  >  NC_002947/5867647‑5867943
                                                                                                                                                    |                                                                                                                                                     
gCAGGTCGAAACGCAGCATCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCTCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGcc                                                                                                                                                     <  1:978244/150‑1 (MQ=255)
       gAAACGCAGCATCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCg                                                                                                                                              >  1:1893539/1‑150 (MQ=255)
       gAAACGCAGCATCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGCCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCg                                                                                                                                              >  2:1487050/1‑150 (MQ=255)
          aCGCAGCATCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCGCTCACGGTGTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTgg                                                                                                                                           <  1:1487050/150‑1 (MQ=255)
          aCGCAGCATCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGCGATCCCCCTGCCGttt                                                                                                                                           <  2:1942476/150‑3 (MQ=255)
          aCGCAGCATCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTgg                                                                                                                                           <  2:1893539/150‑1 (MQ=255)
          aCGCAGCATCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTgg                                                                                                                                           <  2:1479625/150‑1 (MQ=255)
            gcagcaTCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGa                                                                                                                                         >  1:2211643/1‑150 (MQ=255)
               gcaTCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTa                                                                                                                                      >  2:676848/1‑150 (MQ=255)
                      gcCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGc                                                                                                                               <  1:676848/150‑1 (MQ=255)
                         cgccAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCGTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCggg                                                                                                                            <  1:2344107/147‑1 (MQ=255)
                         cGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTACCTACAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCggg                                                                                                                            <  1:725272/150‑1 (MQ=255)
                           gCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGtt                                                                                                                          <  2:1807913/150‑1 (MQ=255)
                                cTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTTTTTTATGGCTTACCTGTAGCAACAACGGCAGGGGGATCGCCCCTGCCGTGTGATTAATCAGGCGGGTTTCGcc                                                                                                                     <  2:1614841/150‑1 (MQ=255)
                                cTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGcc                                                                                                                     <  1:1431866/150‑1 (MQ=255)
                                 tGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCg                                                                                                                    >  2:274683/1‑150 (MQ=255)
                                  gATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGa                                                                                                                                         <  1:1221163/128‑1 (MQ=255)
                                  gATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGa                                                                                                                                         >  2:1221163/1‑128 (MQ=255)
                                   aTGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTa                                                                                                                  <  1:990414/150‑1 (MQ=255)
                                    tGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAg                                                                                                                 <  2:210862/150‑1 (MQ=255)
                                    tGGTGCGGATGCCGGTGCAGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAg                                                                                                                 <  2:2197526/150‑1 (MQ=255)
                                       tGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCCGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCt                                                                                                              >  2:202229/1‑150 (MQ=255)
                                       tGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCt                                                                                                              >  1:1498685/1‑150 (MQ=255)
                                        gCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCtt                                                                                                             >  2:1490902/1‑150 (MQ=255)
                                              gCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGAtt                                                                                                       <  1:274683/150‑1 (MQ=255)
                                                cgatGCGGTTTGCCGGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTAAAAAAAGAAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATtat                                                                                                     <  2:167774/147‑1 (MQ=255)
                                                  gTGCGGTTTCCCTGCAACGTGCCGATATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTa                                                                                                                  >  2:778041/1‑135 (MQ=255)
                                                  gTGCGGTTTCCCTGCAACGTGCCGATATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTa                                                                                                                  <  1:778041/135‑1 (MQ=255)
                                                    gCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGc                                                                                                 <  1:699888/150‑1 (MQ=255)
                                                       gTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCg                                                                                                                    >  2:1791445/1‑128 (MQ=255)
                                                       gTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCg                                                                                                                    <  1:1791445/128‑1 (MQ=255)
                                                         ttCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCccacc                                                                                            <  1:1366708/150‑1 (MQ=255)
                                                             cTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGAt                                                                                        <  2:2119050/150‑1 (MQ=255)
                                                             cTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGAt                                                                                        >  1:1177391/1‑150 (MQ=255)
                                                             cTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCACAGCAGAt                                                                                        >  2:183843/1‑150 (MQ=255)
                                                             cTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGATTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGAt                                                                                        >  1:793457/1‑150 (MQ=255)
                                                              tGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGCGATCCCCCTGcc                                                                                                                                               >  2:81181/1‑94 (MQ=255)
                                                              tGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGCGATCCCCCTGcc                                                                                                                                               <  1:81181/94‑1 (MQ=255)
                                                              tGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGa                                                                                                         <  2:485637/132‑1 (MQ=255)
                                                              tGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGa                                                                                                         >  1:485637/1‑132 (MQ=255)
                                                              tGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATc                                                                                       >  1:2248231/1‑150 (MQ=255)
                                                                cAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAAt                                                                                                                                    >  1:951518/1‑103 (MQ=255)
                                                                cAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCaa                                                                                     >  2:807645/1‑150 (MQ=255)
                                                                 aaCGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAg                                                                                    >  2:275667/1‑150 (MQ=255)
                                                                   cGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGAc                                                                                  <  1:807645/150‑1 (MQ=255)
                                                                   cGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGAc                                                                                  <  1:429822/150‑1 (MQ=255)
                                                                        cGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAg                                                                               <  1:132305/148‑1 (MQ=255)
                                                                        cGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAg                                                                               >  2:132305/1‑148 (MQ=255)
                                                                           tATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCAc                                                                          >  2:712908/1‑150 (MQ=255)
                                                                              cAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCACTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAATACGAGGCCACCGa                                                                       <  2:1726782/150‑1 (MQ=255)
                                                                               aaTGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGAc                                                                      >  2:1151610/1‑150 (MQ=255)
                                                                                aTGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGc                                                                                                           >  1:1033279/1‑112 (MQ=255)
                                                                                aTGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGc                                                                                                           <  2:1033279/112‑1 (MQ=255)
                                                                                    cGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTatca                                                                 >  2:1795801/1‑150 (MQ=255)
                                                                                     gTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATAAAGACGAGGCCACCGACTatcat                                                                >  2:1956929/1‑150 (MQ=255)
                                                                                       cgcgGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCg                                                              <  2:2211643/150‑1 (MQ=255)
                                                                                          ggACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGaa                                                           <  2:2248231/150‑1 (MQ=255)
                                                                                                 gTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAg                                                    >  1:586149/1‑150 (MQ=255)
                                                                                                     aGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCccac                                                                                             >  2:2382678/1‑105 (MQ=255)
                                                                                                     aGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCccac                                                                                             <  1:2382678/105‑1 (MQ=255)
                                                                                                       aTACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGca                                                       <  2:1514401/141‑1 (MQ=255)
                                                                                                       aTACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGca                                                       >  1:1514401/1‑141 (MQ=255)
                                                                                                       aTACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTg                                              >  2:343562/1‑150 (MQ=255)
                                                                                                                cATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTtgagt                                     >  2:2084866/1‑150 (MQ=255)
                                                                                                                 aTGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTtgagtg                                    >  2:1470777/1‑150 (MQ=255)
                                                                                                                  tGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTtgagtga                                   >  1:370954/1‑150 (MQ=255)
                                                                                                                  tGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTggagtga                                   >  1:560033/1‑150 (MQ=255)
                                                                                                                      ttACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGagcca                               >  1:1951226/1‑150 (MQ=255)
                                                                                                                      ttACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCAGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGagcca                               >  1:322769/1‑150 (MQ=255)
                                                                                                                        aCCTGTAGCAAAAACGGCAGGGTGATCGCACCTGCAGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGagccagc                             <  2:786757/150‑1 (MQ=255)
                                                                                                                        aCCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGagccagc                             <  1:275667/150‑1 (MQ=255)
                                                                                                                          cTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCg                           >  1:2255774/1‑150 (MQ=255)
                                                                                                                           tGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGa                                                                                <  2:2172525/96‑1 (MQ=255)
                                                                                                                           tGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGa                                                                                >  1:2172525/1‑96 (MQ=255)
                                                                                                                             tAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGagc                                 >  1:2155253/1‑141 (MQ=255)
                                                                                                                             tAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGagc                                 <  2:2155253/141‑1 (MQ=255)
                                                                                                                             tAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAAc                        >  2:1655772/1‑150 (MQ=255)
                                                                                                                                cAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCACACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAAcgcg                     >  2:1776609/1‑150 (MQ=255)
                                                                                                                                 aaaaaCGACAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAAt                                                          <  1:2334717/112‑1 (MQ=255)
                                                                                                                                 aaaaaCGACAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAAt                                                          >  2:2334717/1‑112 (MQ=255)
                                                                                                                                  aaaaCGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGNGAt                   <  2:1498685/150‑1 (MQ=255)
                                                                                                                                   ccaCGGCAGGGGCGATCCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTtga                                       <  2:868054/127‑1 (MQ=255)
                                                                                                                                   ccaCGGCAGGGGCGATCCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTtga                                       >  1:868054/3‑129 (MQ=255)
                                                                                                                                     gcGGCAGGGGCGATCCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTTGGTGAGCCAGCCGAACGCGATGTa                >  2:1947608/2‑150 (MQ=255)
                                                                                                                                     aCGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTa                >  1:1644879/1‑150 (MQ=255)
                                                                                                                                       ggCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAAc              >  2:2052303/1‑150 (MQ=255)
                                                                                                                                        gCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTtgagtga                                   >  2:298604/1‑128 (MQ=255)
                                                                                                                                        gCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTtgagtga                                   <  1:298604/128‑1 (MQ=255)
                                                                                                                                        gCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAAcc             >  2:1510086/1‑150 (MQ=255)
                                                                                                                                          aGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAg                                                    <  2:201904/109‑1 (MQ=255)
                                                                                                                                          aGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAg                                                    >  1:201904/1‑109 (MQ=255)
                                                                                                                                          aGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAACCGa           <  1:202229/150‑1 (MQ=255)
                                                                                                                                           gggggATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAACCGAg          <  1:1510086/150‑1 (MQ=255)
                                                                                                                                             gggATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAACCGAGtt        <  1:1795801/150‑1 (MQ=255)
                                                                                                                                                gATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAACCGAGTtgt      <  1:1151610/150‑1 (MQ=255)
                                                                                                                                                gATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAACCGAGTtgt      <  1:1776609/150‑1 (MQ=255)
                                                                                                                                                gATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAACCGAGTtgt      <  1:712908/150‑1 (MQ=255)
                                                                                                                                                gATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAACCGAGTtgt      <  2:2255774/150‑1 (MQ=255)
                                                                                                                                                    gCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAACCGAGTTGTGCAt  >  2:1383650/1‑150 (MQ=255)
                                                                                                                                                    gCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGACTATAAGCCCACCAGATCAAGAAGAGGCCACCGACTATCATCGGAATGCACAGAAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAACCGAGGTGTGCAt  >  2:1232369/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GCAGGTCGAAACGCAGCATCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTAGCAAAAACGGCAGGGGGATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAACCGAGTTGTGCAT  >  NC_002947/5867647‑5867943

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: