| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,089,083 | Δ1 bp | 13.8% | coding (113/510 nt) | PP_2697 ← | flavin reductase domain‑containing oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,089,083 | 0 | A | . | 13.8% | 244.9 / 36.2 | 87 | coding (113/510 nt) | PP_2697 | flavin reductase domain‑containing oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (34/41); new base . (4/8); total (38/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.18e-01 | |||||||||||
GTTGGAAATGCCGACCTGCTCACCTGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATGGTAGGTCCTGTGGCTGCATTCATTTCAGCGTGCGT > NC_002947/3088935‑3089231 | gTTGGAAATGCCGACCTGCTCACCTGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGaa > 2:1482003/1‑150 (MQ=255)gTTGGAAATGCCGACCTGCTCACCTGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGaa > 2:1789443/1‑150 (MQ=255) aaaTGCCGACCTGCTCACCTGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGGCACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTG‑AGCCGAt < 1:894256/150‑1 (MQ=255) aaaTGCCGACCTGCTCACCTGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTG‑AGCCGAt < 1:1453685/150‑1 (MQ=255) gCCGACCTGCTCACCTGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATGTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCgg > 2:203748/1‑150 (MQ=255) gACCTGCTCACCTGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTATCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑Tc > 2:2104443/1‑150 (MQ=255) cTGCTCACCTGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCAcc > 1:1696239/1‑150 (MQ=255) cTGCTCACCTGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTG‑AGCCGATCGGC‑ttcacc < 2:1981303/150‑6 (MQ=255) cTGCTCACCTGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGCG‑AGCCGATCGGC‑ttcacc < 1:806030/150‑6 (MQ=255) tGCTCACCTGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTG‑AGCCGATCGGCTTCACCt > 1:2305819/1‑150 (MQ=255) cACCTGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCgt < 1:1316950/150‑1 (MQ=255) cACCTGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTG‑AGCCGATCGGCTTCACCtgcca < 2:666382/150‑5 (MQ=255) cACCTGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTG‑AGCCGATCGGCTTCACCtgcca < 2:2305819/150‑5 (MQ=255) aCCTGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCgtg > 1:175047/1‑150 (MQ=255) aCCTGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCgtg > 1:803336/1‑150 (MQ=255) tGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCgtggtg > 1:629768/1‑150 (MQ=255) aCAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCg > 2:884543/1‑150 (MQ=255) gTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAAt > 2:470311/1‑150 (MQ=255) gACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCAc > 1:36855/1‑150 (MQ=255) aCCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCAcc < 2:784899/150‑1 (MQ=255) ccGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGGCATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCg < 1:522567/150‑1 (MQ=255) cGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGc > 1:914518/1‑113 (MQ=255) cGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGc > 1:2159693/1‑113 (MQ=255) cGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGc < 2:914518/113‑1 (MQ=255) cGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGc < 2:2159693/113‑1 (MQ=255) cGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGt < 1:1988043/150‑1 (MQ=255) ccAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGAt > 1:2443092/1‑150 (MQ=255) aGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCATGATGCCGGATGc < 2:803336/150‑1 (MQ=255) ccTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGt < 1:947833/150‑1 (MQ=255) ccTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGAGGCCTGATGctt < 2:1473663/150‑3 (MQ=255) ccTGGCGGATTTGCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGt < 1:1425946/150‑1 (MQ=255) ggCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGt < 2:1311761/150‑1 (MQ=255) gCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTg > 1:1348344/1‑150 (MQ=255) ggTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCt > 1:1800370/1‑150 (MQ=255) ggTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCt < 1:1522402/150‑1 (MQ=255) gTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTg < 2:1461994/150‑1 (MQ=255) gCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGaaaa < 1:2104443/150‑1 (MQ=255) gCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGaaaa > 2:1948109/1‑150 (MQ=255) ccGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGcc > 1:914268/1‑118 (MQ=255) ccGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGcc < 2:914268/118‑1 (MQ=255) gAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTc < 1:1482003/150‑1 (MQ=255) cTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGAc < 2:175047/150‑1 (MQ=255) ggACATCACACTGAATGACACCAGCGGCGGGCTCACCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACgg < 1:1948109/150‑1 (MQ=255) gACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGc > 1:1704270/1‑150 (MQ=255) cacTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCg > 2:245425/1‑150 (MQ=255) acTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGc > 1:2242249/1‑150 (MQ=255) cTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCGCCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGcc > 1:627300/1‑150 (MQ=255) cTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAATTCGACGGCTCGATCGcc < 2:1696239/150‑1 (MQ=255) cTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGcc < 1:203748/150‑1 (MQ=255) tGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCg > 1:821557/1‑150 (MQ=255) aaTGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTG‑AGCCGATCGGCTTCACCtgc > 2:513119/1‑69 (MQ=37) aaTGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTG‑AGCCGATCGGCTTCACCtgc < 1:513119/71‑3 (MQ=37) aTGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCgtg > 2:2385388/1‑73 (MQ=255) aTGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCgtg < 1:2385388/73‑1 (MQ=255) tgcAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGaa > 1:82549/3‑150 (MQ=255) ccAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCCCCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGaaa > 2:2031845/1‑150 (MQ=255) cAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGcc > 2:1352659/1‑139 (MQ=255) cAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGcc < 1:1352659/139‑1 (MQ=255) gcggGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACa < 1:2453278/150‑1 (MQ=255) cggGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACAt < 1:180280/150‑1 (MQ=255) gggCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATg < 2:1704270/150‑1 (MQ=255) gggCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATg < 2:1931368/150‑1 (MQ=255) cTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATGGTa < 2:1800370/150‑1 (MQ=255) cTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATGGTa < 1:1069379/150‑1 (MQ=255) tCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTg < 2:2391808/103‑1 (MQ=255) tCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTg > 1:2391808/1‑103 (MQ=255) tCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATGGTAGGTc < 1:245425/150‑1 (MQ=255) tACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCTAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATGGTAGGTCCtgt < 1:847240/150‑1 (MQ=255) cGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTCCTGGAAAGCAACATGGTAGGTCCCGTgg > 2:1129682/1‑150 (MQ=255) gCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCTGTACTGGAAAGCAACATGGTAGGTCCTGTGGc < 2:1348344/150‑1 (MQ=255) gCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACt < 1:265544/123‑1 (MQ=255) gCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACt > 2:265544/1‑123 (MQ=255) gTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGACGTACTGGAAAACAACAGCGAAGGGCCTATggcggc > 2:1097202/1‑150 (MQ=255) aGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATGGTAGGTCCTGTGGCTGcat < 2:2443092/150‑1 (MQ=255) aaCGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTTCCTGGCGAAAAGTCGACGGCTCCATCGCCGTACTGGAAAGCAACATGGTAGGTCCTGTGGCTGcattc > 2:265572/1‑150 (MQ=255) accacgaaGGTG‑AGCCGATCGGCTTCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATGGTAGATCCTGGGGCGGcagtcatt > 2:1635797/8‑150 (MQ=255) cacgaaGGTG‑AGCCGATCGGCTTCACCTGCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGcc > 2:1788109/6‑106 (MQ=38) cacgaaGGTG‑AGCCGATCGGCTTCACCTGCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGcc < 1:1788109/101‑1 (MQ=38) tGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATGGTAGGTCCTGTGGCTGCATTCATTTCa < 1:2104207/150‑1 (MQ=255) atctaGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGCTGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATGGTAGGTCCTGTGGCTGCATTCATTTct < 1:1134495/146‑2 (MQ=255) gCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATGGTAGGTCCTGTGGCTGCATTCATTTCAgc < 2:1906446/150‑1 (MQ=255) aGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATGGTAGGTCCtgt < 2:2364425/130‑1 (MQ=255) aGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATGGTAGGTCCtgt > 1:2364425/1‑130 (MQ=255) aGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATCTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATGGTAGGTCCTGTGGCTGCATTCATTTCAgcgt > 2:1276162/1‑150 (MQ=255) ggTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGAGGCGTAGTGCCCGAGCGGCTGGCGAAAAGTCGACGGGTCCATCGCCGTACTGAAAAGCAACATGATAGGAGCTGTGGGTGGAGTCATGTCAgagat > 2:1134495/1‑146 (MQ=255) gTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGCGCGAATATTGAGAAGTCGACGGCGCGATCGCCGTACTGGAAAGCAACATGGTAGGTCCTGTGGCTGCATTCATTTCAgcgtgc < 1:884543/150‑1 (MQ=255) gTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATGGTAGGTCCTGTGGCTGCATTCATTTCAgcgtgc < 2:450936/150‑1 (MQ=255) gTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATGGTAGGTACTGTGGCTGCATTCATTTCAgcgtgc > 1:1950351/1‑150 (MQ=255) gAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATGGTAGGTCCTGTGGCTGCATTCATTTCAgcgtgcgt < 1:1097202/150‑1 (MQ=255) | GTTGGAAATGCCGACCTGCTCACCTGACAGGATGTTGACCGTGAAGCGGCCAGCCTGGCGGATTTTCGGGTAGCTGGCCGAACTGGACATCACACTGAATGACACCAGCGGCGGGCTCATCGATACGCTGTAGAACGACTGGCAGGTGAAGCCGATCGGC‑TCACCTTCGTGGTGCGATGTAATCACCGTGATGCCGGATGCGTAGTGCCCGAGTGCCTGGCGAAAAGTCGACGGCTCGATCGCCGTACTGGAAAGCAACATGGTAGGTCCTGTGGCTGCATTCATTTCAGCGTGCGT > NC_002947/3088935‑3089231 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |