Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,141,536 Δ1 bp 5.9% coding (410/972 nt) PP_2757 → sugar‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,141,5360T. 5.9% 299.5 / 13.2 101coding (410/972 nt)PP_2757sugar‑binding protein
Reads supporting (aligned to +/- strand):  ref base T (54/41);  new base . (2/4);  total (56/45)
Fisher's exact test for biased strand distribution p-value = 4.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.49e-01

Only 100 of 101 total aligned reads displayed.

GCAAAAGCCCGATGCGGTAATTCAGACCCTCGGTACCCTGAGCGTGATCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTGAAGAAGGTACTGGCCGATCATCCGC  >  NC_002947/3141390‑3141679
                                                                                                                                                     |                                                                                                                                                
gCAAAAGCCCGATGCGGTAATTCAGACCCTCGGTACCCTGAGCGTGATCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTcgc                                                                                                                                               >  1:1793180/1‑150 (MQ=255)
gCAAAAGCCCGATGCGGTAATTCAGACCCTCGGTACCCTGAGCGTGATCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATAGCAGTATACCCTCGACAACACCACC‑‑‑ATTGACAACGTctc                                                                                                                                               >  2:1097681/1‑148 (MQ=255)
     aGCCCGATGCGGTAATTCAGACCCTCGGTACCCTGAGCGTGATCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGcggccg                                                                                                                                          >  1:430338/1‑150 (MQ=255)
        ccGATGCGGTAATTCAGACCCTCGGTACCCTGAGCGTGATCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCggccggcc                                                                                                                                       >  2:1422856/1‑150 (MQ=255)
              cGGTAATTCAGACCCTCGGTACCCTGAGCGTGATCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGCCAACGCGCGGCCGGCcgcgacgt                                                                                                                                <  2:2076902/150‑5 (MQ=255)
                  aaTTCAGACCCTCGGTACCCTGAGCGTGATCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGc                                                                                                                            <  1:1389033/150‑1 (MQ=255)
                       aGACCCTCGGTACCCTGAGCGTGATCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAAc                                                                                                                       <  1:832148/150‑1 (MQ=255)
                         aCCCTCGGTACCCTGAGCGTGATCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCAGCTGTTCGGCCAACGCGCGGCCGGCCGCGACGTTGTCCGag                                                                                                                        <  2:448764/150‑2 (MQ=25)
                          cccTCGGTACCCTGAGCGTGATCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACCACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGc                                                                                                                    <  1:1598935/150‑1 (MQ=255)
                           ccTCGGTACCCTGAGCGTGATCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCt                                                                                                                   >  2:1380887/1‑150 (MQ=255)
                                  aCCCTGAGCGTGATCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTgcgc                                                                                                            <  1:75103/150‑1 (MQ=255)
                                  aCCCGGAGCGTGATCGACCCCTGGCTCAAGCGCAGCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTgcgc                                                                                                            <  2:360153/150‑1 (MQ=255)
                                    ccTGAGCGTGATCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCAGCGCGTTGACCTAACAGCTGGTGCGCGa                                                                                                          >  1:1001059/1‑150 (MQ=255)
                                     cTGAGCGTGATCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGac                                                                                                         >  2:2326238/1‑150 (MQ=255)
                                            tGATCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGTCGAACAGCTGGTGCGCGACACcggcg                                                                                                  <  2:1793180/150‑1 (MQ=255)
                                               tCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTgc                                                                                                              >  2:1925456/1‑135 (MQ=255)
                                               tCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTgc                                                                                                              <  1:1925456/135‑1 (MQ=255)
                                                cGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGCGCGGCCGGCcgcgac                                                                                                                                  >  1:840885/1‑112 (MQ=255)
                                                 gACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAg                                                                                             <  1:2326238/150‑1 (MQ=255)
                                                  aCCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGCGCGGCCGGCCGCGACGTTgtc                                                                                                                            <  2:2443458/118‑3 (MQ=255)
                                                  aCCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGCGCGGCCGGCCGCGACGTTgtc                                                                                                                            >  1:2443458/1‑116 (MQ=255)
                                                           tCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATcc                                                                                   >  1:676383/1‑150 (MQ=255)
                                                           tCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACAACGGCGGCAAGGGCCGCATcc                                                                                   >  2:425111/1‑150 (MQ=255)
                                                           tCAAGCGCATCCAGGCAGCAGGTATCCCACTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCTCGCGTTGGCCGAACAGCTAGTGCGCGACACCGGCGGCAAGGGCCGCATcc                                                                                   >  2:1251248/1‑150 (MQ=255)
                                                             aaGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTg                                                                                 <  2:676383/150‑1 (MQ=255)
                                                             aaGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTg                                                                                 <  1:1097681/150‑1 (MQ=255)
                                                                 ccATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGgtgt                                                                             <  2:2128471/149‑1 (MQ=255)
                                                                    tCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCa                                                                          >  2:1784706/1‑150 (MQ=255)
                                                                     ccAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCaa                                                                         <  1:1784706/150‑1 (MQ=255)
                                                                      cAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAAc                                                                        <  1:1380887/150‑1 (MQ=255)
                                                                       aGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACg                                                                       >  1:1336265/1‑150 (MQ=255)
                                                                                 tATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACgg                                                             >  2:2359422/1‑150 (MQ=255)
                                                                                  aTCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTg                                                                                                                  <  2:1395584/96‑1 (MQ=255)
                                                                                  aTCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTg                                                                                                                  >  1:1395584/1‑96 (MQ=255)
                                                                                     ccGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGgt                                                                               <  1:1845433/128‑1 (MQ=255)
                                                                                     ccGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGgt                                                                               >  2:1845433/1‑128 (MQ=255)
                                                                                     ccGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTg                                                         >  1:766377/1‑150 (MQ=255)
                                                                                      cGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGTCAAGAGCCGCATCCTGGTGGGCAACGGCGTCTGCGGtgtgg                                                        >  2:2360706/1‑149 (MQ=255)
                                                                                           ttCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGCCACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTc                                                   <  1:95380/150‑1 (MQ=255)
                                                                                            tCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCTGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCt                                                  <  1:2249453/150‑1 (MQ=255)
                                                                                                cATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGc                                              >  1:1870129/1‑150 (MQ=255)
                                                                                                 aTTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCg                                             >  1:727022/1‑150 (MQ=255)
                                                                                                 aTTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGACGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCCGTGCg                                             >  2:1288526/1‑150 (MQ=255)
                                                                                                  ttGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGa                                            >  2:1472020/1‑150 (MQ=255)
                                                                                                    gATGTGCCATCGCAGTACAGCCTGAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTACTGCGGGGTGCCGGTCTGTGCGATc                                          >  2:1193442/1‑150 (MQ=255)
                                                                                                      tgtgCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTgg                                                                                >  1:575225/1‑110 (MQ=255)
                                                                                                      tgtgCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTgg                                                                                <  2:575225/110‑1 (MQ=255)
                                                                                                      tgtgCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCg                                        >  1:498561/1‑150 (MQ=255)
                                                                                                         gCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACgggg                                                           <  1:806052/128‑1 (MQ=255)
                                                                                                         gCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACgggg                                                           >  2:806052/1‑128 (MQ=255)
                                                                                                           cATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGc                                                                     >  1:1956424/1‑116 (MQ=255)
                                                                                                           cATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGc                                                                     <  2:1956424/116‑1 (MQ=255)
                                                                                                            aTCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGGCACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTacga                                  >  2:1658955/1‑150 (MQ=255)
                                                                                                            aTCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTg                                                                                 >  2:2394107/1‑103 (MQ=255)
                                                                                                            aTCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTg                                                                                 <  1:2394107/103‑1 (MQ=255)
                                                                                                            aTCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTa                                                                <  2:1968543/120‑1 (MQ=255)
                                                                                                            aTCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTa                                                                >  1:1968543/1‑120 (MQ=255)
                                                                                                            aTCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTacga                                  >  1:1286560/1‑150 (MQ=255)
                                                                                                            aTCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTacga                                  >  1:2393766/1‑150 (MQ=255)
                                                                                                            aTCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTacga                                  <  1:1422856/150‑1 (MQ=255)
                                                                                                            aTCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTacga                                  <  2:1336265/150‑1 (MQ=255)
                                                                                                             tCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTacgac                                 >  2:1985321/1‑150 (MQ=255)
                                                                                                               gCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTg                                                                                                                  >  2:490112/1‑67 (MQ=255)
                                                                                                               gCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTg                                                                                                                  <  1:490112/67‑1 (MQ=255)
                                                                                                               gCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTAcgacga                               <  2:727022/150‑1 (MQ=255)
                                                                                                               gCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTAcgacga                               <  1:1678421/150‑1 (MQ=255)
                                                                                                               gCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTAcgacga                               <  1:2359422/150‑1 (MQ=255)
                                                                                                                 aGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGt                             <  2:430338/150‑1 (MQ=255)
                                                                                                                   tACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTg                           >  1:239679/1‑150 (MQ=255)
                                                                                                                     cAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTgaa                         <  2:239679/150‑1 (MQ=255)
                                                                                                                      aGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTgaag                        >  1:1612275/1‑150 (MQ=255)
                                                                                                                      aGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTgaag                        >  2:754705/1‑150 (MQ=255)
                                                                                                                        ccTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTgaagaa                      >  1:2105572/1‑150 (MQ=255)
                                                                                                                        ccTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTgaagaa                      <  1:1319567/150‑1 (MQ=255)
                                                                                                                        ccTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCAACCCGGTCAGTCGAGttcgagag                      >  2:1319567/1‑144 (MQ=255)
                                                                                                                        ccTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCGGTGCGATCCGCTGCGACGAGTTgaagaa                      >  1:1303447/1‑150 (MQ=255)
                                                                                                                         cTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACCGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTacgac                                 <  2:2103491/138‑1 (MQ=255)
                                                                                                                         cTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTacgac                                 >  1:2103491/1‑138 (MQ=255)
                                                                                                                         cTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTGaagaag                     <  2:498561/150‑1 (MQ=255)
                                                                                                                          tCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGt                             >  2:2023756/1‑141 (MQ=255)
                                                                                                                          tCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGt                             <  1:2023756/141‑1 (MQ=255)
                                                                                                                          tCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTGAAGAAgg                    >  2:36144/1‑150 (MQ=255)
                                                                                                                              caacaCCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTGAAGAAGGTACt                <  2:1286560/150‑1 (MQ=255)
                                                                                                                               aacaCCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTGAAGAAGGTACTg               >  2:2441362/1‑150 (MQ=255)
                                                                                                                                 caccacC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCGACGACGAGTTGAAGAAGGTACTGGc             <  2:1077040/150‑1 (MQ=255)
                                                                                                                                  accacc‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAg                              >  1:2032775/1‑132 (MQ=255)
                                                                                                                                  accacc‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAg                              <  2:2032775/132‑1 (MQ=255)
                                                                                                                                   ccacc‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTGAAGAAGGTACTGGCCg           <  2:2393766/150‑1 (MQ=255)
                                                                                                                                    cacc‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCtgtg                                               >  1:608241/1‑113 (MQ=255)
                                                                                                                                    cacc‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCtgtg                                               <  2:608241/113‑1 (MQ=255)
                                                                                                                                    cacc‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTGAAGAAGGTACTGGCCgc          >  2:4646/1‑149 (MQ=255)
                                                                                                                                     acc‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACg                                                                       <  2:190495/88‑1 (MQ=255)
                                                                                                                                     acc‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACg                                                                       >  1:190495/1‑88 (MQ=255)
                                                                                                                                     acc‑‑‑GCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTGAAGAAGGTACTGGCCGat         <  2:1001059/150‑1 (MQ=255)
                                                                                                                                       c‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACAGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTGAAGAAGGTACTGGCCGatca       >  2:695125/1‑150 (MQ=255)
                                                                                                                                             ggACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGTGAAGTTTTAGAAGGTACTGGCCGATCATcc    >  1:1181437/1‑150 (MQ=255)
                                                                                                                                              gACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTGAAGAAGGTACTGGCCGATCATCCg   >  1:345454/1‑150 (MQ=255)
                                                                                                                                              gACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTGAAGAAGGTACTGGCCGATCATACg   >  1:479258/1‑150 (MQ=255)
                                                                                                                                               aCAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTGAAGAAGGTACTGGCCGATCATCCGc  >  2:1483021/1‑150 (MQ=255)
                                                                                                                                               aCAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATACGCTACGACGAGTTGAAGAAGGTACTGGCCGATCATCCGc  >  2:1483582/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                
GCAAAAGCCCGATGCGGTAATTCAGACCCTCGGTACCCTGAGCGTGATCGACCCCTGGCTCAAGCGCATCCAGGCAGCAGGTATCCCGCTTTTCACCATTGATGTGCCATCGCAGTACAGCCTCAACAACACCACC‑‑‑TCGGACAACGTCGCGGCCGGCCGCGCGTTGGCCGAACAGCTGGTGCGCGACACCGGCGGCAAGGGCCGCATCCTGGTGTTCAACGGCTTCTACGGGGTGCCGGTCTGTGCGATCCGCTACGACGAGTTGAAGAAGGTACTGGCCGATCATCCGC  >  NC_002947/3141390‑3141679

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: