Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,282,323	Δ1 bp	5.7%	coding (86/300 nt)	PP_2883 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,282,323	0	G	.	5.7%	276.2 / 10.5	87	coding (86/300 nt)	PP_2883	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (43/38);  new base . (3/2);  total (47/40)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.13e-01

TGCCATAGCGCTGCCAGTGTTCGAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGATGTTCTT  >  NC_002947/3282174‑3282470                                                                                                                                                      |                                                                                                                                                     tGCCATAGCGCTGCCAGTGTTCGAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAg                                                                                                                                                      >  2:2149531/1‑150 (MQ=255)  gCCATAGCGCTGCCAGTGTTCGAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGc                                                                                                                                                     <  1:2066473/150‑1 (MQ=255)     aTAGCGCTGCCAGTGTTCGAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCAc                                                                                                                                                  >  2:1790250/1‑150 (MQ=255)           cTGCCAGTGTTCGAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAg                                                                                                                                            <  1:329941/150‑1 (MQ=255)              ccAGTGTTCGAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAggtg                                                                                                                                         <  1:1790250/150‑1 (MQ=255)               cAGTGTTCGAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAggtgg                                                                                                                                        <  1:1916420/150‑1 (MQ=255)                aGTGTTCGAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAggtgg‑t                                                                                                                                      >  1:1413142/1‑150 (MQ=255)                    ttCGAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCA‑CCACCTTGAGGTGGCTGCAc                                                                                                                                  <  1:1249037/150‑1 (MQ=255)                       gAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCAc                                                                                                                                                  <  2:1867435/132‑1 (MQ=255)                       gAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCAc                                                                                                                                                  >  1:1867435/1‑132 (MQ=255)                          gccggccTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAg                                                                                                                            >  2:2046316/1‑150 (MQ=255)                           ccggccTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCGCCTCAAGGTGG‑TGCACGCCAAgg                                                                                                                           <  2:1192757/150‑1 (MQ=255)                             ggccTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGc                                                                                                                         <  2:1120252/150‑1 (MQ=255)                             ggccTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGc                                                                                                                         <  1:772776/150‑1 (MQ=255)                              gccTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGcc                                                                                                                        >  1:1666089/1‑150 (MQ=255)                                cTGTTCGCCGTCGGGGGCTTGGCAACGATTGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCcac                                                                                                                      <  1:1077210/150‑1 (MQ=255)                                cTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAggtg                                                                                                                                         <  2:69841/132‑1 (MQ=255)                                cTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAggtg                                                                                                                                         >  1:69841/1‑132 (MQ=255)                                cTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCcac                                                                                                                      >  2:2093487/1‑150 (MQ=255)                                        cGTCGGGGGCGTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCa                                                                                                              <  2:2203859/150‑1 (MQ=255)                                         gTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAg                                                                                                             <  1:1924808/150‑1 (MQ=255)                                         gTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAg                                                                                                             <  2:1490736/150‑1 (MQ=255)                                                gCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTgg                                                                                                      >  2:1177210/1‑150 (MQ=255)                                                  ttGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGAACAACAAGGGCCACATTGCGCAGGCACTGGTa                                                                                                    <  1:1881952/150‑1 (MQ=255)                                                       aacgaacgCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACAt                                                                                               <  1:914294/150‑1 (MQ=255)                                                       aacgaacgCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACAt                                                                                               >  2:491323/1‑150 (MQ=255)                                                          gaacgCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATccc                                                                                            >  1:2323096/1‑150 (MQ=255)                                                            acgCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCNCgg                                                                                          <  2:1496884/150‑1 (MQ=255)                                                                      ccAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCCGGGATTATGCTCAAGGTGG‑TGCACGCCAAGGGCCACCTTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTg                                                                                >  1:2253630/1‑150 (MQ=255)                                                                             ttCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCt                                                                         >  1:2176457/1‑150 (MQ=255)                                                                             ttCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCt                                                                         >  2:195948/1‑150 (MQ=255)                                                                              tCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCtg                                                                        <  1:195948/150‑1 (MQ=255)                                                                                ggTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCtgtg                                                                      >  2:286861/1‑150 (MQ=255)                                                                                  tATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTggg                                                                    >  2:45928/1‑150 (MQ=255)                                                                                    tCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTc                                                                  >  1:574721/1‑150 (MQ=255)                                                                                      cAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTa                                                                                                    <  1:1982870/114‑1 (MQ=255)                                                                                      cAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTa                                                                                                    >  2:1982870/1‑114 (MQ=255)                                                                                      cAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCaa                                                                >  1:2312970/1‑150 (MQ=255)                                                                                       aGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAg                                                               >  2:613865/1‑150 (MQ=255)                                                                                        gggCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCaata                                                              <  2:2312970/150‑3 (MQ=255)                                                                                          gCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATc                                                            >  1:670912/1‑150 (MQ=255)                                                                                           ccAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCCCTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCa                                                           >  2:807881/1‑150 (MQ=255)                                                                                           ccAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCa                                                           <  2:2323096/150‑1 (MQ=255)                                                                                            cAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAggg                                                                                                                          <  1:1307658/86‑1 (MQ=255)                                                                                            cAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAggg                                                                                                                          >  2:1307658/1‑86 (MQ=255)                                                                                                 tCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGTAGTCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAAtt                                                     >  1:61373/1‑150 (MQ=255)                                                                                                  cAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTc                                                    <  1:1160751/150‑1 (MQ=255)                                                                                                  cAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTc                                                    <  2:1666089/150‑1 (MQ=255)                                                                                                    gTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGc                                                  <  1:2046316/150‑1 (MQ=255)                                                                                                       gCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCgg                                               >  1:85148/1‑150 (MQ=255)                                                                                                        ccAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGc                                              >  2:1289361/1‑150 (MQ=255)                                                                                                         cAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCg                                             >  1:40305/1‑150 (MQ=255)                                                                                                          aGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCgt                                            >  2:1856482/1‑150 (MQ=255)                                                                                                          aGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCgt                                            <  2:574721/150‑1 (MQ=255)                                                                                                           gCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCgtg                                           >  1:124799/1‑150 (MQ=255)                                                                                                            cccTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTgg                                                                                                      >  1:675519/1‑90 (MQ=255)                                                                                                            cccTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTgg                                                                                                      <  2:675519/90‑1 (MQ=255)                                                                                                               tGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTgg                                       >  1:1110580/1‑150 (MQ=255)                                                                                                                    gCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCtg                                  <  2:124799/150‑1 (MQ=255)                                                                                                                      cGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCg                                                                                           <  2:390768/91‑1 (MQ=255)                                                                                                                      cGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCg                                                                                           >  1:390768/1‑91 (MQ=255)                                                                                                                      cGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCtgat                                >  1:1165997/1‑150 (MQ=255)                                                                                                                      cGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCtgat                                <  1:1565811/150‑1 (MQ=255)                                                                                                                         cATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACTCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTgatgat                             >  2:1350849/1‑150 (MQ=255)                                                                                                                           tCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGAtct                           >  1:1690122/1‑150 (MQ=255)                                                                                                                             gATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCtga                                 >  1:2297494/1‑142 (MQ=255)                                                                                                                             gATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCtga                                 >  1:2297151/1‑142 (MQ=255)                                                                                                                             gATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCtga                                 <  2:2297494/142‑1 (MQ=255)                                                                                                                             gATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCtga                                 <  2:2297151/142‑1 (MQ=255)                                                                                                                             gATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCg                         <  1:579724/150‑1 (MQ=255)                                                                                                                             gATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCg                         >  2:569065/1‑150 (MQ=255)                                                                                                                              tgcacgccgcgATGGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCgg                        >  1:2108950/6‑150 (MQ=255)                                                                                                                               tCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGc                       <  2:2253630/150‑1 (MQ=255)                                                                                                                                 aGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCt                     >  2:2183502/1‑150 (MQ=255)                                                                                                                                  ggCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTc                    >  1:196930/1‑150 (MQ=255)                                                                                                                                   gccgccATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCCAGGGCCACATTGCGGAGGCACTGGTAGACATCCCGGGCAATCGGGGAACTGCTGTGGGGCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCa                   >  2:865350/1‑150 (MQ=255)                                                                                                                                    ccgccATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTAAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTGAt                  >  1:1111355/1‑150 (MQ=255)                                                                                                                                        gcccttggcgTGCA‑CCACCTTGAGGTGGCTGCACGCCGAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCgg              >  1:2394942/7‑150 (MQ=38)                                                                                                                                          tggcggcgTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGc            <  2:2108950/148‑1 (MQ=255)                                                                                                                                          ccttggcgTGCA‑CCACCTTGAGGTGGCTGCACGCCGAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAg                                                          >  2:957652/5‑104 (MQ=25)                                                                                                                                          ccttggcgTGCA‑CCACCTTGAGGTGGCTGCACGCCGAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAg                                                          <  1:957652/100‑1 (MQ=25)                                                                                                                                          ccttggcgTGCA‑CCACCTTGAGGTGGCTGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGc            >  2:2261466/5‑150 (MQ=255)                                                                                                                                           cgcgGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCGCATCCGGGcc           <  2:1165997/150‑1 (MQ=255)                                                                                                                                             cggcgTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGa         <  2:670912/150‑1 (MQ=255)                                                                                                                                              ggcgTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGAt        >  1:1407804/1‑150 (MQ=255)                                                                                                                                                   gCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGAt        <  2:1927101/145‑1 (MQ=255)                                                                                                                                                   gCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGAt        >  1:1927101/1‑145 (MQ=255)                                                                                                                                                    cAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGATGTTCtt  <  1:613865/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     TGCCATAGCGCTGCCAGTGTTCGAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGATGTTCTT  >  NC_002947/3282174‑3282470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑