| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 313,852:1 | +A | 7.8% | intergenic (+23/+28) | ygaU → / ← yrfG | murein cross‑linking regulator/purine nucleotidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 313,852 | 1 | . | A | 7.8% | 389.5 / 27.2 | 102 | intergenic (+23/+28) | ygaU/yrfG | murein cross‑linking regulator/purine nucleotidase |
| Reads supporting (aligned to +/- strand): ref base . (43/51); new base A (4/4); total (47/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.16e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
CAGCCATTGCCATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAACCGCCGT > NC_002947/313705‑314000 | cAGCCATTGCCATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑tt < 2:2116674/150‑1 (MQ=255)cAGCCATTGCCATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑tt < 2:923955/150‑1 (MQ=255) gCCNTTGCCATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTcg > 2:1512544/1‑150 (MQ=255) ccATTGCCATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTcgc < 2:1456360/150‑1 (MQ=255) aTTGCCATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑gg < 1:712194/150‑1 (MQ=255) ccATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGgcgc > 2:347890/1‑150 (MQ=255) ccATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGgcgc > 2:837350/1‑150 (MQ=255) tGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGcc < 2:435213/150‑1 (MQ=255) tCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCcgc < 1:763616/150‑1 (MQ=255) tCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCcgc < 2:1832373/150‑1 (MQ=255) tATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATg > 2:2130864/1‑150 (MQ=255) ggCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCCCATTCGC‑GGGCGCGCCCGCGaagag > 1:1293506/1‑146 (MQ=255) ggCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCCCATTCGC‑GGGCGCGCCCGCGaagag < 2:1293506/149‑4 (MQ=255) aaaTGCCACTAAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATTTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGcc < 1:994300/149‑1 (MQ=255) aaTGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACCCCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGCTCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGcc < 2:1670853/149‑1 (MQ=255) aaTGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGGATGGGGcc > 1:1670853/1‑149 (MQ=255) tGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGCTAGTCAAACAACCGGACAAATGCTATCCGGTGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTa > 1:46341/1‑150 (MQ=255) tGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGc < 1:548230/146‑1 (MQ=255) tGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGc > 2:548230/1‑146 (MQ=255) tcAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGCATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACa < 2:499621/149‑1 (MQ=255) ccAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACa < 1:837350/150‑1 (MQ=255) cAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGTGAATGTTTCCTTACAg < 2:1281496/150‑1 (MQ=255) cAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGaagag > 1:2342710/1‑137 (MQ=255) cAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGaagag < 2:2342710/140‑4 (MQ=255) acaacaAGATTTCCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCa < 1:1851303/150‑1 (MQ=255) aacaaGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTTGC‑GGGCGCCCATCCGAATGGGGCCTTACAGGCCTACCAGt < 1:438319/150‑1 (MQ=255) aacaaGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGt < 1:1180086/150‑1 (MQ=255) acaaGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACATGCCTACCAGTa < 2:1542826/150‑1 (MQ=255) acaaGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTa < 1:117678/150‑1 (MQ=255) caaGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCCCATTCGC‑GGGCGCGCCCGCGaagag > 1:1153355/1‑126 (MQ=39) caaGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCCCATTCGC‑GGGCGCGCCCGCGaagag < 2:1153355/129‑4 (MQ=39) aaGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGCATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAAc < 2:2071527/150‑1 (MQ=255) tttCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCg < 2:46341/150‑1 (MQ=255) tctCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCg < 1:1318845/148‑1 (MQ=255) gAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCATAACCGTAGCGCCCGGaaa > 2:1318845/1‑150 (MQ=255) ggCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATc < 2:343931/150‑1 (MQ=255) caacaaGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTc < 1:2130864/150‑1 (MQ=255) caacaaGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCCCATTCGC‑GGgcgc < 1:971346/102‑1 (MQ=255) caacaaGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCCCATTCGC‑GGgcgc > 2:971346/1‑102 (MQ=255) acaaGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGa > 2:31345/1‑150 (MQ=255) acaaGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGa < 1:239139/150‑1 (MQ=255) acaaGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGa < 1:2246655/150‑1 (MQ=255) aaGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCACGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGAcc > 2:674143/1‑150 (MQ=255) ccGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGAccgcc > 2:1755071/1‑150 (MQ=255) gATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACcgccgc > 2:940600/1‑150 (MQ=255) tCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATg < 2:2326173/98‑1 (MQ=255) tCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATg > 1:2326173/1‑98 (MQ=255) cAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAAt > 2:1065850/1‑96 (MQ=255) cAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAAt < 1:1065850/96‑1 (MQ=255) cAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAActc < 1:31345/150‑1 (MQ=255) acCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAAGGGGGCCTGACAGGCCTACCAGTAAGTCCCGGTAATCCGCGACCGCCGCAAACTCTTCac > 2:1706662/1‑149 (MQ=255) ccGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTa > 2:1286099/1‑150 (MQ=255) ccGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTa < 2:1523719/150‑1 (MQ=255) cAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCcg > 1:1140893/1‑150 (MQ=255) aaGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGaa > 2:2047591/1‑82 (MQ=255) aaGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGaa < 1:2047591/82‑1 (MQ=255) aGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCcgcg < 2:568027/150‑1 (MQ=255) gATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCgg < 1:1755071/150‑1 (MQ=255) aTCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCCCATTCGC‑GGgcgc < 1:725235/71‑1 (MQ=255) aTCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCCCATTCGC‑GGgcgc > 2:725235/1‑71 (MQ=255) tATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCt > 1:456308/1‑150 (MQ=255) tCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTAc < 1:783744/93‑1 (MQ=255) tCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTAc > 2:783744/1‑93 (MQ=255) tCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGc > 2:963113/1‑150 (MQ=255) tCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGc > 1:98539/1‑150 (MQ=255) ggggCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCttt < 2:544903/150‑1 (MQ=255) ggggCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTA‑TTCGCGGGGCACGAAC‑CGTAGTTGGCCTTAAAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCttt < 1:1124639/150‑1 (MQ=255) gggCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTg < 2:378376/150‑1 (MQ=255) gggCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGAGCCTTACAGGGATACCAGTCCCTCTTGTTTAATCTTGTCCGCCGCAAACACTTCAGTATCCCGCGGCCCTGCTTTg > 1:1116586/1‑150 (MQ=255) gCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGc > 1:1204567/1‑83 (MQ=255) gCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGc < 2:1204567/83‑1 (MQ=255) gCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCt > 2:2387462/1‑150 (MQ=255) ggTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTaa < 1:285818/90‑1 (MQ=255) ggTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTaa > 2:285818/1‑90 (MQ=255) tgctgcGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCg < 1:1512544/150‑1 (MQ=255) ctgcGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGc > 1:1887537/1‑150 (MQ=255) ctgcGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGc > 1:452434/1‑150 (MQ=255) tgcGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCt > 1:175851/1‑150 (MQ=255) gcGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTg < 2:452434/150‑1 (MQ=255) tCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCAc < 1:1805884/150‑1 (MQ=255) tgactgaTCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGc > 2:2127693/1‑150 (MQ=255) aTCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCaa < 1:963113/150‑1 (MQ=255) cGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGt < 1:1758167/150‑1 (MQ=255) cTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTTTCCGGCTGGCGCACCGCCAGCAAGTGc < 2:1140893/150‑1 (MQ=255) aaGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGcccc > 1:2025723/1‑150 (MQ=255) aaGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCGTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGcccc > 2:1040753/1‑150 (MQ=255) gTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCcac > 1:460322/1‑150 (MQ=255) tCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTTATGCGTCGCAAACTCTTCAGTACCATGCCGCTCTCCATTTCGATTTGTGTGGGGCACCGCCAGCAAGTGCCCcaca > 1:532685/1‑150 (MQ=255) cTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCacac < 2:460322/150‑1 (MQ=255) tACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCaa < 1:347890/150‑1 (MQ=255) aCAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCaaa < 2:2439255/150‑1 (MQ=255) aGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATGCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTCGCTATCCGGCCGGCGCACCGCCAGCAAGTGCTCCACACCAAAcc > 2:144095/1‑150 (MQ=255) gCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATccc > 2:1504088/1‑91 (MQ=255) gCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATccc < 1:1504088/91‑1 (MQ=255) ccTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAAccgcc > 2:2238693/1‑150 (MQ=255) ccTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAAccgcc < 1:1286099/150‑1 (MQ=255) tc‑tTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGAccgc < 1:2286390/68‑1 (MQ=255) tc‑tTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGAccgc > 2:2286390/1‑68 (MQ=255) tc‑tTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAACCGCCGt > 1:1793365/1‑150 (MQ=255) tc‑tTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAACCGCCGt > 2:825402/1‑150 (MQ=255) | CAGCCATTGCCATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGC‑GGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAACCGCCGT > NC_002947/313705‑314000 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |