Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 874,539:1 +T 6.7% coding (115/840 nt) PP_0759 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947874,5391.T 6.7% 409.8 / 22.5 104coding (115/840 nt)PP_0759hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (49/48);  new base T (2/5);  total (51/53)
Fisher's exact test for biased strand distribution p-value = 4.37e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-01

Only 100 of 106 total aligned reads displayed.

GCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGTGTGCAGGCCATT  >  NC_002947/874391‑874688
                                                                                                                                                     |                                                                                                                                                     
gCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑t                                                                                                                                                      <  1:2073327/150‑1 (MQ=255)
     cACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAAc                                                                                                                                                 <  2:144109/150‑1 (MQ=255)
           cGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTTCG‑ACGCCAAc                                                                                                                                           <  1:958096/150‑1 (MQ=255)
            gACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TTCGACGCCAACa                                                                                                                                          <  2:8242/150‑1 (MQ=255)
            gACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTACTGTTGGCGTTCG‑ACGCCAACa                                                                                                                                          <  1:2139466/150‑1 (MQ=255)
              cTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGt                                                                                                                                        >  1:483957/1‑150 (MQ=255)
               tctgCCTAGTATACGGCGAATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCAGCCTGCCGGCCGGTTTCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTa                                                                                                                                       <  2:583381/147‑1 (MQ=255)
                 ggCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACa                                                                                                                                     <  2:483957/150‑1 (MQ=255)
                    cTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGt                                                                                                                                  >  2:1607353/1‑150 (MQ=255)
                    cTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGt                                                                                                                                  >  2:384563/1‑150 (MQ=255)
                     tAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGtt                                                                                                                                 >  1:1024983/1‑150 (MQ=255)
                         aTACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGc                                                                                                                             <  2:1708286/150‑1 (MQ=255)
                         aTACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGc                                                                                                                             <  1:1554513/150‑1 (MQ=255)
                              gggcATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGct                                                                                                                        >  2:1052263/3‑150 (MQ=255)
                              gcgcATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGc                                                                                                                                               >  1:38870/1‑127 (MQ=255)
                              gcgcATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGc                                                                                                                                               <  2:38870/127‑1 (MQ=255)
                                    gtgGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCATCATGCTCTCGAc                                                                                                                  >  1:1294774/1‑150 (MQ=255)
                                       gATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGa                                                                                                               >  1:1064675/1‑150 (MQ=255)
                                        aTAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGAt                                                                                                              >  2:2122976/1‑150 (MQ=255)
                                           gggAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAg                                                                                                           >  1:862148/1‑150 (MQ=255)
                                           gggAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAg                                                                                                           <  2:1000447/150‑1 (MQ=255)
                                            ggAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAgg                                                                                                          <  2:178849/150‑1 (MQ=255)
                                            ggAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGAATTCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAgg                                                                                                          <  1:1730937/150‑1 (MQ=255)
                                             gAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGt                                                                                                         <  2:2216314/150‑1 (MQ=255)
                                               gtgtTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGATGGATGAGGTCa                                                                                                       >  1:489181/1‑150 (MQ=255)
                                               gtgtTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCa                                                                                                       >  1:1833994/1‑150 (MQ=255)
                                                tgtTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGa                                                                                                               >  2:656979/1‑141 (MQ=255)
                                                tgtTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGa                                                                                                               <  1:656979/141‑1 (MQ=255)
                                                 gtTTTCATGCGTAAGTCTTTTCTCGTCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGCGCATGTTCAGCATTCTCTCGACCGATGAGGTCAAc                                                                                                     <  2:1207722/150‑1 (MQ=255)
                                                  ttttCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAAcc                                                                                                    >  1:1853490/1‑150 (MQ=255)
                                                      cATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGAt                                                                                                <  2:1853490/150‑1 (MQ=255)
                                                        tGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGt                                                                                              <  1:1415578/150‑1 (MQ=255)
                                                        tGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGt                                                                                              <  1:384563/150‑1 (MQ=255)
                                                         gCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTa                                                                                             >  2:1948735/1‑150 (MQ=255)
                                                              aGTNTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACCGTACAGGTTCAGCATGCTCTCGCCCGATTAGGTCAACCAGATGTACgcgc                                                                                        >  2:1499818/1‑150 (MQ=255)
                                                                      gTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTTCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGAt                                                                                                <  1:164269/134‑1 (MQ=255)
                                                                      gTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTTCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGAt                                                                                                >  2:164269/1‑134 (MQ=255)
                                                                         atcaGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATcag                                                                             >  2:1908981/1‑150 (MQ=255)
                                                                         atcaGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTACTGTTGGCGTTCG‑ACGCCAACa                                                                                                                                          <  2:1641603/89‑1 (MQ=38)
                                                                         atcaGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTACTGTTGGCG‑TTCGACGCCAACa                                                                                                                                          >  1:1641603/1‑89 (MQ=38)
                                                                          tcaGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCa                                                                                                                               <  1:680706/99‑1 (MQ=255)
                                                                          tcaGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCa                                                                                                                               >  2:680706/1‑99 (MQ=255)
                                                                           caGCCTGCTGAGTGCTGGCATGCTTCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGCGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCGGATGTTCGCGCAGTCGTATcagca                                                                           <  2:1207935/150‑1 (MQ=255)
                                                                            aGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGTG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATcagcag                                                                          >  2:438721/1‑150 (MQ=255)
                                                                               ctgctgAGTGCTGGCATCCTGCTGGCCCCCTGCCAGGCGGCGACAACCAACCGAGGGCGTGCTGCGGGCT‑GCGGGGGCGAGCTGGACGTGTTGAGGATGGTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGAcc                                                                       >  2:271021/1‑150 (MQ=255)
                                                                                  ctgAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTg                                                                    >  1:719048/1‑150 (MQ=255)
                                                                                     aGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGt                                                                 <  1:2047213/150‑1 (MQ=255)
                                                                                        gCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCTGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGaa                                                              <  1:1976610/150‑1 (MQ=255)
                                                                                        gCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGaa                                                              <  1:221743/150‑1 (MQ=255)
                                                                                        gCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGaa                                                              <  1:1948735/150‑1 (MQ=255)
                                                                                         cTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAg                                                             <  2:1907533/150‑1 (MQ=255)
                                                                                          tGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGAt                                                                                                              <  1:1126689/100‑1 (MQ=255)
                                                                                          tGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGAt                                                                                                              >  2:1126689/1‑100 (MQ=255)
                                                                                          tGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTAcgc                                                                                          <  2:1017489/120‑1 (MQ=255)
                                                                                          tGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTAcgc                                                                                          >  1:1017489/1‑120 (MQ=255)
                                                                                          tGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTAcgc                                                                                          <  2:1017623/120‑1 (MQ=255)
                                                                                          tGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTAcgc                                                                                          >  1:1017623/1‑120 (MQ=255)
                                                                                          tGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGc                                                            >  2:1121673/1‑150 (MQ=255)
                                                                                          tGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGc                                                            >  2:2390327/1‑150 (MQ=255)
                                                                                            gCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAg                                                                                                           >  2:1490599/1‑101 (MQ=255)
                                                                                            gCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAg                                                                                                           <  1:1490599/101‑1 (MQ=255)
                                                                                                 ctgctgGCCGGCTGCCAGGCGGTGAATACCACCAGCGGGCTGGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGc                                                     <  1:124348/150‑1 (MQ=255)
                                                                                                  tgctgGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGGGACGCATCGAGCa                                                    >  1:2064262/1‑150 (MQ=255)
                                                                                                     tgGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCTGTATCATCTCGACCGATCAGTTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAgg                                                 <  1:2122976/150‑1 (MQ=255)
                                                                                                     tgGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAgg                                                 <  1:503736/150‑1 (MQ=255)
                                                                                                       gCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGgt                                               <  1:2390327/150‑1 (MQ=255)
                                                                                                       gCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGgt                                               >  1:974016/1‑150 (MQ=255)
                                                                                                         cGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAAc                                                                                                     <  2:1555059/94‑1 (MQ=255)
                                                                                                         cGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAAc                                                                                                     >  1:1555059/1‑94 (MQ=255)
                                                                                                         cGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGgtgt                                             >  1:2418867/1‑150 (MQ=255)
                                                                                                          ggCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGCTGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGTATCGAGCAAGGGtgtg                                            >  1:706508/1‑150 (MQ=255)
                                                                                                          ggCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGtgtg                                            >  2:387287/1‑150 (MQ=255)
                                                                                                            cTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCt                                          >  2:235179/1‑150 (MQ=255)
                                                                                                             tGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTc                                         <  2:1024983/150‑1 (MQ=255)
                                                                                                               ccAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGa                                       <  1:2103779/150‑1 (MQ=255)
                                                                                                                 aGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGa                                       <  1:111535/148‑1 (MQ=255)
                                                                                                                 aGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGa                                       >  2:111535/1‑148 (MQ=255)
                                                                                                                      gTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGa                                                                         <  1:1554542/109‑1 (MQ=255)
                                                                                                                      gTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGa                                                                         >  2:1554542/1‑109 (MQ=255)
                                                                                                                         aaTACCACCAGCGGCGGTGCTGTTGGTG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAgc                             <  1:438721/150‑1 (MQ=255)
                                                                                                                          gtcccaccaGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAgcg                            >  2:818302/4‑150 (MQ=255)
                                                                                                                           tACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAgcgc                           >  2:1342704/1‑150 (MQ=255)
                                                                                                                              caccaGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGa                                                       <  1:2087707/119‑1 (MQ=255)
                                                                                                                              caccaGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGa                                                       >  2:2087707/1‑119 (MQ=255)
                                                                                                                              caccaGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGa                        >  2:1741807/1‑150 (MQ=255)
                                                                                                                              caccaGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGa                        >  2:1113342/1‑150 (MQ=255)
                                                                                                                              caccaGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGa                        >  2:1112687/1‑150 (MQ=255)
                                                                                                                                          tacTGTTGGCGTTCG‑ACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGa                                                                                                 <  1:1000622/63‑1 (MQ=25)
                                                                                                                                          tacTGTTGGCGTTCG‑ACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGa                                                                                                 >  2:1000622/3‑65 (MQ=25)
                                                                                                                                            cTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCgtgt            <  2:1161602/148‑1 (MQ=255)
                                                                                                                                            cTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCgtgt            <  2:1162041/148‑1 (MQ=255)
                                                                                                                                            cTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCgtgt            >  1:1161602/1‑148 (MQ=255)
                                                                                                                                            cTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCgtgt            >  1:1162041/1‑148 (MQ=255)
                                                                                                                                             tGTTGGCGTTCG‑ACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGTGTGCa         >  1:2159031/1‑150 (MQ=255)
                                                                                                                                              gTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGTGTGCAg        >  1:1140653/1‑150 (MQ=255)
                                                                                                                                               ttGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGtgtg                                            <  1:1422335/113‑1 (MQ=255)
                                                                                                                                               ttGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGtgtg                                            >  2:1422335/1‑113 (MQ=255)
                                                                                                                                                  gCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGTGTGCAGGCCa    <  1:1607353/150‑1 (MQ=255)
                                                                                                                                                   cG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGTGTGCAGGCCAt   <  1:1499818/150‑1 (MQ=255)
                                                                                                                                                    g‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCTACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGTGTGCAGGCCAtt  >  1:1144995/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCG‑TCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGTGTGCAGGCCATT  >  NC_002947/874391‑874688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑