Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,863,401:1 +A 5.1% coding (1045/1068 nt) PP_1666 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,863,4011.A 5.1% 402.9 / 14.2 99coding (1045/1068 nt)PP_1666hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (43/51);  new base A (2/3);  total (45/54)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.94e-01

TCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTCCTGGTCGGCATCATGCTGGC  >  NC_002947/1863253‑1863546
                                                                                                                                                      |                                                                                                                                                 
tCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑a                                                                                                                                                  >  2:773549/1‑150 (MQ=255)
 cGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑Ac                                                                                                                                                 <  2:1887136/150‑1 (MQ=255)
  gTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACg                                                                                                                                                >  2:399345/1‑150 (MQ=255)
   tGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACgg                                                                                                                                               >  1:2270434/1‑150 (MQ=255)
    gAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGc                                                                                                                                              >  1:1574194/1‑150 (MQ=255)
     aaCAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCAAGCCAGTACCGGCAGTGGACGCAACAGCACACG‑TCTGCGCTCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCt                                                                                                                                             >  1:2377884/1‑150 (MQ=255)
      aCAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCtt                                                                                                                                            <  2:1978472/150‑1 (MQ=255)
         gCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCG‑TCGAACGGCTTggg                                                                                                                                         <  2:748167/150‑3 (MQ=255)
             cGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACGCAAGCCG‑TCGAACGGCTTgggtgct                                                                                                                                     <  2:2094465/150‑7 (MQ=255)
             cGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCG‑TCGAACGGCTTgggtgct                                                                                                                                     <  1:18241/150‑7 (MQ=255)
                 tgcAGCTTGGCCAGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCt                                                                                                                                 >  1:750027/3‑150 (MQ=255)
                  ccAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTg                                                                                                                                <  2:948095/150‑1 (MQ=255)
                  atcgcatggcctgtcgAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGTACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTg                                                                                                                                >  2:593802/7‑150 (MQ=255)
                   cAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTgg                                                                                                                               <  1:358563/150‑1 (MQ=255)
                    aGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGt                                                                                                                              >  2:1627339/1‑150 (MQ=255)
                       ttGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAg                                                                                                                           >  1:1579147/1‑150 (MQ=255)
                         ggactggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGa                                                                                                                         <  1:356676/147‑1 (MQ=255)
                           cctggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAgc                                                                                                                       >  2:1441981/1‑150 (MQ=255)
                            ctggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTaa                                                                                                                            >  1:888654/1‑144 (MQ=255)
                            ctggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTaa                                                                                                                            <  2:888654/144‑1 (MQ=255)
                            ctggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAgcg                                                                                                                      >  2:2436725/1‑150 (MQ=255)
                              ggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCt                                                                                                                    <  2:1159519/150‑1 (MQ=255)
                                acAAGATGCCTGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTg                                                                                                                  <  2:1959679/149‑1 (MQ=255)
                                 cAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCt                                                                                                                                             <  2:1382429/122‑1 (MQ=255)
                                 cAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCt                                                                                                                                             >  1:1382429/1‑122 (MQ=255)
                                 cAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGc                                                                                                                 <  2:2360137/150‑1 (MQ=255)
                                 cAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGc                                                                                                                 >  2:1389254/1‑150 (MQ=255)
                                 cAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGc                                                                                                                 >  2:665800/1‑150 (MQ=255)
                                 cAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTAG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGc                                                                                                                 >  2:584629/1‑150 (MQ=255)
                                  aaGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGcc                                                                                                                >  2:581062/1‑150 (MQ=255)
                                    gCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGt                                                                                                              <  1:1045087/150‑1 (MQ=255)
                                    gCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGt                                                                                                              <  2:1757371/150‑1 (MQ=255)
                                      tGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGtga                                                                                                            >  1:376622/1‑150 (MQ=255)
                                      tGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGtga                                                                                                            <  1:1523449/150‑1 (MQ=255)
                                      ggCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGtga                                                                                                            <  2:851894/149‑1 (MQ=255)
                                       gCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGtgac                                                                                                           <  2:2098001/150‑1 (MQ=255)
                                           gAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGc                                                                                                                 >  1:317514/1‑140 (MQ=255)
                                           gAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGc                                                                                                                 <  2:317514/140‑1 (MQ=255)
                                           gAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGtgactgac                                                                                                       <  1:2416597/150‑1 (MQ=255)
                                                  cGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTc                                                                                                                                    >  2:668509/1‑114 (MQ=255)
                                                  cGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTc                                                                                                                                    <  1:668509/114‑1 (MQ=255)
                                                      cGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTg                                                                                            <  2:2270434/150‑1 (MQ=255)
                                                       tggccggCACCGCCGGTGCCTGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTgg                                                                                           >  2:658400/6‑150 (MQ=255)
                                                         gCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGAt                                                                                         <  1:354625/150‑1 (MQ=255)
                                                           aGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTg                                                                                                                                >  2:1607521/1‑109 (MQ=255)
                                                           aGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTg                                                                                                                                <  1:1607521/109‑1 (MQ=255)
                                                           aGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATct                                                                                       <  2:306241/150‑1 (MQ=255)
                                                               aCCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATctggct                                                                                   >  1:922740/1‑150 (MQ=255)
                                                                ccGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATctggctg                                                                                  <  1:399345/150‑1 (MQ=255)
                                                                 cggcggTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTg                                                                                            >  2:2079948/1‑139 (MQ=255)
                                                                 cggcggTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTg                                                                                            <  1:2079948/139‑1 (MQ=255)
                                                                 cggcggTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATctggctgg                                                                                 <  2:750027/150‑1 (MQ=255)
                                                                  ggcggTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTggg                                                                                >  1:2153007/1‑150 (MQ=255)
                                                                  ggcggTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTggg                                                                                <  2:1579147/150‑1 (MQ=255)
                                                                   ccggTGCCTGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGgc                                                                               <  1:658400/149‑1 (MQ=255)
                                                                       tGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTg                                                                           <  1:776375/150‑1 (MQ=255)
                                                                          cGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCAc                                                                        >  2:1604174/1‑150 (MQ=255)
                                                                          cGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCAc                                                                        <  2:922740/150‑1 (MQ=255)
                                                                           ggCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCAct                                                                       >  2:102061/1‑150 (MQ=255)
                                                                           ggCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTAG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCAct                                                                       <  1:584629/150‑1 (MQ=255)
                                                                             ccATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCActgc                                                                     <  1:1441981/150‑1 (MQ=255)
                                                                              cATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCActgct                                                                    >  1:394232/1‑150 (MQ=255)
                                                                              cATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCActgct                                                                    >  2:2432845/1‑150 (MQ=255)
                                                                               aagCCAGTACCGGTAGGGGACTCTGCAGC‑CTCGCAACTCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCActgctg                                                                   >  2:1168814/3‑150 (MQ=255)
                                                                               aTGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATctggctgg                                                                                 <  2:1736608/136‑1 (MQ=255)
                                                                               aTGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATctggctgg                                                                                 >  1:1736608/1‑136 (MQ=255)
                                                                                   cAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCg                                                               >  2:209691/1‑150 (MQ=255)
                                                                                      tACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCtg                                                            <  2:847593/150‑1 (MQ=255)
                                                                                       aCCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCtgt                                                           <  1:2432845/150‑1 (MQ=255)
                                                                                         cGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGtgc                                                         >  2:417711/1‑150 (MQ=255)
                                                                                          ggCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGtgactg                                                                                                         >  2:1043326/1‑101 (MQ=255)
                                                                                          ggCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGtgactg                                                                                                         <  1:1043326/101‑1 (MQ=255)
                                                                                              gTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGTTGGGCGCTGCACTGCTGATCGCTGTGCTGCtt                                                    <  2:1342954/150‑1 (MQ=255)
                                                                                              gTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCtt                                                    <  1:1627339/150‑1 (MQ=255)
                                                                                                  aCGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTtata                                                <  1:700469/150‑1 (MQ=255)
                                                                                                      cgcAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCt                                            >  2:2364280/1‑150 (MQ=255)
                                                                                                             cgcgCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACaa                                      >  2:1984325/1‑150 (MQ=255)
                                                                                                              gcgcAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGc                                              <  2:2121130/141‑1 (MQ=255)
                                                                                                              gcgcAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGc                                              >  1:2121130/1‑141 (MQ=255)
                                                                                                              gcgcAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAat                                     >  2:2221096/1‑150 (MQ=255)
                                                                                                                  aGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTc                                 <  1:773549/150‑1 (MQ=255)
                                                                                                                    cccGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCtt                               <  2:2442221/150‑1 (MQ=255)
                                                                                                                      cgcgGCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTAc                             <  2:425276/150‑1 (MQ=255)
                                                                                                                      cgcgCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTAc                             <  1:665800/150‑1 (MQ=255)
                                                                                                                      cgcgCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTAc                             <  2:2153007/150‑1 (MQ=255)
                                                                                                                          ccTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTgctgct                                                     <  2:1712731/122‑1 (MQ=255)
                                                                                                                          ccTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTgctgct                                                     >  1:1712731/1‑122 (MQ=255)
                                                                                                                           cTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGt                        <  1:1984325/150‑1 (MQ=255)
                                                                                                                             gcgcAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTc                      >  1:1562463/1‑150 (MQ=255)
                                                                                                                                    cagcACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTCCTGGTCg               <  1:2072646/150‑1 (MQ=255)
                                                                                                                                    cagcACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTCCTGGTCg               >  1:1174330/1‑150 (MQ=255)
                                                                                                                                       cACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCAc                                                                        <  2:441437/90‑1 (MQ=255)
                                                                                                                                       cACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCAc                                                                        >  1:441437/1‑90 (MQ=255)
                                                                                                                                          gcAAGCCG‑TCGAACGGCTTGGGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTCCTGGTCGGcatca         >  2:1942833/2‑150 (MQ=255)
                                                                                                                                          gcAAGCCG‑TCGAACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTCCTGGTCGGcatca         >  1:2286384/2‑150 (MQ=255)
                                                                                                                                          ccAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTCCTGGTCGGcatca         >  2:2164581/1‑150 (MQ=255)
                                                                                                                                              gCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTCCTGGTCGGCATCATGCt     <  1:2364280/150‑1 (MQ=255)
                                                                                                                                                 gTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTCCTGGTCGGCATCATGCTGGc  <  1:2436725/150‑1 (MQ=255)
                                                                                                                                                  ttCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCActgctg                                                                   >  2:1829462/1‑84 (MQ=255)
                                                                                                                                                  ttCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCActgctg                                                                   <  1:1829462/84‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                 
TCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGC‑CGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTCCTGGTCGGCATCATGCTGGC  >  NC_002947/1863253‑1863546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑