New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 31361 = | 203 (2.180) | 13 (0.150) | 10/228 | NT | 6.7% | intergenic (+25/‑43) | PP_0026/PP_0027 | cobalt/cadmium/zinc exporter/membrane protein |
? | NC_002947 | 31389 = | 179 (2.100) | intergenic (+53/‑15) | PP_0026/PP_0027 | cobalt/cadmium/zinc exporter/membrane protein |
TAGGTACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGGGTGATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/31520‑31361 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagggtgatgtTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTGCCGGTATAGT > NC_002947/31389‑31537 TAGGTACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGG > 1:411636/1‑150 TAGGTACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGG > 1:1627600/1‑150 AGGTACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGA < 1:13410/150‑1 AGGTACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGA < 1:2309387/150‑1 AGGTACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGA < 1:2309335/150‑1 GGTACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAG > 1:1800058/1‑150 GTACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGG < 2:410168/150‑1 GTACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGG > 1:450535/1‑150 GTACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCA‑TTTTTTTGCAACATCACCCT‑CAGCCAGGAGGG < 1:1438142/150‑1 ACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGGGT < 2:2203405/150‑1 ACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGGGT > 1:608910/1‑150 ACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGGGT < 2:1091603/150‑1 ACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGGGT > 1:1522892/1‑150 ACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGGGT > 2:2442207/1‑150 ACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGGGT > 2:2442708/1‑150 CTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGGGTG > 1:1277248/1‑150 TTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGGGTGA < 1:2079903/150‑1 TTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCCCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGGGTGA < 2:1370355/150‑1 TGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGGGTGATGTT < 2:2063580/150‑1 TCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGGG < 1:58348/128‑1 TCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGGG > 2:58348/1‑128 AGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCTCCTGGC‑TGAGGGTGATGTTGCAAA < 1:2020285/101‑1 ACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGA < 1:2325405/78‑1 ACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGA > 2:2325405/1‑78 TGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGGGT < 2:1148190/60‑1 TGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGGGT > 1:1148190/1‑60 TTTGCAACATCACCCT‑CAGCCAGGAGTGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCT < 2:2020285/101‑1 AACATCACCCT‑CAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCA > 2:629236/1‑150 AACATCACCCT‑CAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCA > 2:1785198/1‑150 AACATCACCCT‑CAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGG < 1:1353298/82‑1 AACATCACCCT‑CAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGG > 2:1353298/1‑82 ACATCACCCT‑CAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCAC > 2:1118224/1‑150 ATCACCCT‑CAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGT < 1:2278345/85‑1 ATCACCCT‑CAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGT > 2:2278345/1‑85 TCACCCT‑CAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAA < 2:54467/121‑1 TCACCCT‑CAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAA > 1:54467/1‑121 TCACCCT‑CAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGC < 1:2303931/91‑1 TCACCCT‑CAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGC > 2:2303931/1‑91 GAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCANGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTG > 1:1966269/1‑150 GGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTGCCG < 1:410168/150‑1 GGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTGCCG > 2:1810555/1‑150 GGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGAAGTGTGGCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTGCCG < 1:145354/150‑1 GGTGATGTTGAAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACCACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTGCCG < 2:1262260/150‑1 GTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATC > 2:1804658/1‑127 GTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATC < 1:1804658/127‑1 TGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTCCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTGCCGGT > 2:839500/1‑150 ATGTTGCAAAACGAAAGCGGTGAGCGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTGCCGGTAT < 1:490609/150‑1 TGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTGCCGGTATA < 1:151169/150‑1 TGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCGCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTGCCGGTATA < 1:1487326/150‑1 GTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTGCCGGTATAG < 1:2352237/150‑1 TTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTGCCGGTATAGT < 2:2309335/150‑1 TTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTGCCGGTATAGT < 2:2309387/150‑1 TTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTGCCGGTATAGT < 2:1750686/150‑1 TTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTGCCGGTATAGT > 1:961757/1‑150 TTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTGCCGGTATAGT < 1:350117/150‑1 TTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGC > 1:173629/1‑67 TTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGC < 2:173629/67‑1 TAGGTACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCT‑CAGCCAGGAGGGTGATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/31520‑31361 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagggtgatgtTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTGCCGGTATAGT > NC_002947/31389‑31537 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |