| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 39518 | 157 (1.680) | 13 (0.150) | 10/236 | NT | 8.2% | coding (247/969 nt) | PP_0036 | transcriptional regulator |
| ? | NC_002947 | = 39530 | 143 (1.620) | coding (259/969 nt) | PP_0036 | transcriptional regulator | |||||
TAGAGTTTTTCGCAACAGCACGTTGTGCCAGTTTCAAACAGGCTGCCCGAGGGCTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/39363‑39518‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgacccTCTCGCCTGTGCGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGCTCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGGCACATTGAGCCCTCGGGCAGCCTGTTTGAAACTGGCACAACGT < NC_002947/39530‑39382 TAGAGTTTTTCGCAACAGCACGTTGTGCCAGTTTCAAACAGGCTGCCCGAGGGCTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCC > 2:1858024/1‑150TAGAGTTTTTCGCAACAGCACGTTGTGCCAGTTTCAAACAGGCTGCCCGAGGGCTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCC > 1:494167/1‑150 AGTTTTTCGCAACAGCACGTTGTGCCAGTTTCAAACAGGCTGCCCGAGGGCTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGA < 1:178474/150‑1 AGTTTTTCGCAACAGCACGTTGTGCCAGTTTCAAACAGGCTGCCCGAGGGCTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGA < 1:18713/150‑1 AGTTTTTCGCAACAGCACGTTGTGCCAGTTTCAAACAGGCTGCCCGAGGGCTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGA > 2:2076894/1‑150 AGTTTTTCGCAACAGCACGTTGTGCCAGTTTCAAACAGGCTGCCCGAGGGCTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGA < 1:441944/150‑1 ACGTTGTGCCAGTTTCAAACAGGCTGCCCGAGGGCTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGACCCTCTCGCCTGTGCG < 1:1408671/150‑1 GTGCCAGTTTCAAACAGGCTGCCCGAGGGCTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGACCCTCTCGCCTGTGCGGGTCA < 1:202133/150‑1 TGCCAGTTTCAAACAGGCTGCCCGAGGGCTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGACCCTCTCGCCTGTGCGGGTCAG < 1:2033425/150‑1 tCCAGTTTCAAACAGGCTGCCCGAGGGCTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCGCCCGTGTTTGTCTACAATTACAAGAATCTTGCTCTGACCTGCTCGCCTGTGCTGGTCAGG < 2:456952/149‑1 CCAGTTTCAAACAGGCTGCCCGAGGGCTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGACCCTCTCGCCTGTGCGGGTCAGG < 1:1955536/149‑1 CCAGTTTCAAACAGGCTGCCCGAGGGCTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGACCCTCTCGCCTGTGCGGGTCAGG > 2:1955536/1‑149 TTTCAAACAGGCTGCCCGAGGGCTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCC > 2:525416/1‑119 TTTCAAACAGGCTGCCCGAGGGCTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCC < 1:525416/119‑1 CTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGACCCTCTCGCCTGTGCGGGTCAGG > 2:1723978/1‑123 CTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGACCCTCTCGCCTGTGCGGGTCAGG < 1:1723978/123‑1 AATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGACCCTCTCGCCTGTGCGGGTCAGG > 1:1924822/1‑120 AATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGACCCTCTCGCCTGTGCGGGTCAGG < 2:1924822/120‑1 GCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGACCCTCTCGCCTGTGCGGGTCAGGGCAA < 2:986118/108‑1 GCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGACCCTCTCGCCTGTGCGGGTCAGGGCAA > 1:986118/1‑108 ACAACAAGCTTGCCCTGACCCGCACAGGCGAGAGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGCTCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGGCACATTGAGCCCTCGGGCAGCCT > 2:405381/1‑150 TGACCCTCTCGCCTGTGCGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGCTCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGGCACATTGAGCCCTCGGGCAGCCTGTTTGAAACTGGCAC > 1:411381/1‑150 TGACCCTCTCGCCTGTGCGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGCTCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGGCACATTGAGCCCTCGGGCAGCCTGTTTGAAACTGGCAC > 1:1227367/1‑150 TGACCCTCTCGCCTGTGCGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGCTCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGGCACATTGAGCCCTCG < 2:1952409/127‑1 TGACCCTCTCGCCTGTGCGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGCTCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGGCACATTGAGCCCTCG > 1:1952409/1‑127 ACCCTCTCGCCTGTGCGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGCTCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGGCACATTGAGCCCTCGGGCAGCCTGTTTGAAACTGGCACAA > 2:2443825/1‑150 ACCCTCTCGCCTGTGCGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGCTCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGGCACATTGAGCCCTCGGGCAGCCTGTTTGAAACTGGCACAA < 1:1490615/150‑1 ACCCTCTCGCCTGTGCGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGATCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGCCCCCTGGAGCCCGCGGGCAGCCTGTTTGAAACTGGCACAA > 2:1378911/1‑150 CCCTCTCGCCTGTGCGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGCTCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGGCACATTGAGCCCTCGGGCAGCCTGT > 2:1891235/1‑134 CCCTCTCGCCTGTGCGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGCTCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGGCACATTGAGCCCTCGGGCAGCCTGT < 1:680423/134‑1 CCCTCTCGCCTGTGCGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGCTCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGGCACATTGAGCCCTCGGGCAGCCTGT < 1:1891235/134‑1 CCCTCTCGCCTGTGCGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGCTCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGGCACATTGAGCCCTCGGGCAGCCTGT > 2:680423/1‑134 CCTCTCGCCTGTGCGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGCTCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGGCACATTGAGCCCTCGGGCAGCCTGTTTGAAACTGGCACAACG > 2:290002/1‑150 CCTCTCGCCTGTGCGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGCTCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGGCACATTGAGCCCTCGGGCAGCCTGTTTGAAACTGG < 2:1112615/143‑1 CCTCTCGCCTGTGCGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGCTCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGGCACATTGAGCCCTCGGGCAGCCTGTTTGAAACTGG > 1:1112615/1‑143 CTCTCGCCTGTGCGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGCTCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGGCACATTGAGCCCTCGGGCAGCCTGTTTGAAACTGGCACAACGT > 2:662261/1‑150 TAGAGTTTTTCGCAACAGCACGTTGTGCCAGTTTCAAACAGGCTGCCCGAGGGCTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/39363‑39518‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgacccTCTCGCCTGTGCGGGTCAGGGCAAGCTTGTTGTGTTTGTAGACAAACACGGGAGCACCAATGTGCTCTTCCAGTTTCTCCAAGCGTTTCCGCAGGCCTACCACTGGCACATTGAGCCCTCGGGCAGCCTGTTTGAAACTGGCACAACGT < NC_002947/39530‑39382 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |