| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 161687 | 75 (0.800) | 6 (0.070) | 7/236 | NT | 7.5% | intergenic (‑182/+64) | PP_0152/PP_0153 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 161703 | 77 (0.870) | intergenic (‑198/+48) | PP_0152/PP_0153 | hypothetical protein/hypothetical protein | |||||
CAGACGGTTAGGCCAAGCGTATCACGCAGTGCTGCGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/161532‑161687‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacccgTTGCAGGTGA‑CTGCAGCGGGTTTTTTATTGCCCGAGAGACGCGCAGTCGCGTGCTTCAGATTGCGACCAGTACAGTTTTACAAAAATTAAAATTCGCCTTAACAGTTGTCTGGCACAGCAGTCGTTGTCATCTCTACGCAGCACTG < NC_002947/161703‑161558 CAGACGGTTAGGCCAAGCGTATCACGCAGTGCTGCGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAA > 2:1920991/1‑150 GACGGTTAGGCCAAGCGTATCACGCAGTGCTGCGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTCAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAA > 2:1775338/1‑150 GACGGTTAGGCCAAGCGTATCACGCAGTGCTGCGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAA < 1:1359935/150‑1 GGTTAGGCCAAGCGTATCACGCAGTGCTGCGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCC < 2:1656523/150‑1 GTTAGGCCAAGCGTATCACGCAGTGCTGCGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCG > 1:1516146/1‑150 AAGCGTATCACGCAGTGCTGCGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAA < 1:1298092/136‑1 AAGCGTATCACGCAGTGCTGCGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAA > 2:1298092/1‑136 TATCACGCAGTGCTGCGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGTTGCAGGTGA‑CTG > 2:288034/1‑150 GCAGTGCTGCGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGTTGCAGGTGA‑CTGCAGCGG < 1:288034/150‑1 TGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCAC‑CTGCAACGGGTTTTTTATTGCCCGAGAGACGCGCAGTCGCGTGCTTCAGATTGCGACCAGTACAGTTTTACAAAAATTAAAATTCGCCTTAACAGTTGTCTGGCACAGCAG > 2:731288/1‑150 TCTCTCGGGCAATAAAAAACCCGCTGCAGTCAC‑CTGCAACGGGTTTTTTATTGCCCGAGAGACGCGCAGTCGCGTGCTTCAGATTGCGACCAGTACAGTTTTACAAAAATTAAAATTCGCCTTAACAGTTGTCTGGCACAGCAGTCGTTG < 1:731288/150‑1 TCGGGCAATAAAAAACCCGCTGCA‑GTCACCTGCAACGGGTTTTTTATTGCCCGAGAGACGCGCAGTCGCGTGCTTCAGATTGCGACCA < 1:2436394/88‑1 TCGGGCAATAAAAAACCCGCTGCA‑GTCACCTGCAACGGGTTTTTTATTGCCCGAGAGACGCGCAGTCGCGTGCTTCAGATTGCGACCA > 2:2436394/1‑88 AAAACCCGCTGCAGTCAC‑CTGCAACGGGTTTTTTATTGCCCGAGAGACGCGCAGTCGCGTGCTTCAGATTGCGACCAGTACAGTTTTACAAAAATTAAAATTCGCCTTAACAGTTGTCTGGCACAGCAGTCGTTGTCATCTCTACGCAGC > 1:2340749/1‑150 AAACCCGTTGCAGGTGA‑CTGCAGCGGGTTTTTTATTGCCCGAGAGACGCGCAGTCGCGTGCTTCAGATTGCGACCAGTACAGTTTTACAACAAATAAAACACACCTAAACAGGTGGCTGGCACAGCAGTCGTTGGCATCTCTACCCAGCA > 2:2230484/1‑150 CCCGTTGCAGGTGA‑CTGCAGCGGGTTTTTTATTGCCCGAGAGACGCGCAGTCGCGTGCTTCAGATTGCGACCAGTACAGTTTTACAAAAATTAAAATTCACCTTAACAGTTGTCTGGCACAGCAGTCGTTGTCATCTCTACGCAGCACTG > 1:1729371/1‑150 CAGACGGTTAGGCCAAGCGTATCACGCAGTGCTGCGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/161532‑161687‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacccgTTGCAGGTGA‑CTGCAGCGGGTTTTTTATTGCCCGAGAGACGCGCAGTCGCGTGCTTCAGATTGCGACCAGTACAGTTTTACAAAAATTAAAATTCGCCTTAACAGTTGTCTGGCACAGCAGTCGTTGTCATCTCTACGCAGCACTG < NC_002947/161703‑161558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |