New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 197150	281 (3.010)	21 (0.230)	10/240	NT	7.2%	coding (2656/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 197155	270 (3.010)					coding (2661/26049 nt)	PP_0168	putative surface adhesion protein

CCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/196998‑197150 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacggGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGATGGTGACGCTGACGGTCGAACCGTTGTTGTAGACGTCAT  <  NC_002947/197155‑197007                                                                                                                                                                                                                                                                                                                CCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA                                                                                                                                                          <  2:318944/150‑1  CCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACCGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACGCGGTCGACACCACTACCGCGACCCTGAC                                                                                                                                                         <  2:2109557/150‑1  CCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCAAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGAC                                                                                                                                                         >  1:550904/1‑150   CCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACG                                                                                                                                                        >  1:1550524/1‑150   CCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACACCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACG                                                                                                                                                        >  2:439937/1‑150   CCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACG                                                                                                                                                        >  1:600475/1‑150   CCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACG                                                                                                                                                        >  1:596043/1‑150   CCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACG                                                                                                                                                        >  1:1658319/1‑150   CCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACG                                                                                                                                                        <  1:2383166/150‑1   CCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACG                                                                                                                                                        >  1:786673/1‑150    CGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGCGCAACTGACCCCGAACCCGACCCCGGCTCACACCACGCTCAACGACTCGGTCGATGCCACCACCGCGACCCCGACGG                                                                                                                                                       >  2:1115320/1‑150    CGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGG                                                                                                                                                       >  1:198132/1‑150    CGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGG                                                                                                                                                       >  1:115116/1‑150                 CTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGGCTCGCCGTNAGG                                                                                                                                          <  2:1498602/150‑1                 CTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGGCTCGCCGTCAGG                                                                                                                                          <  1:1055751/150‑1                 CTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTACTTTCGAGCAACTGTCCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGGCTCGCCGTCAGG                                                                                                                                          <  2:1305621/150‑1                 CTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGGCTCGCCGTCAGG                                                                                                                                          <  2:1989573/150‑1                  TACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGGCTCGCCGTCAGGG                                                                                                                                         <  2:1390341/150‑1                    CAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGGCTCGCCGTCAGG                                                                                                                                          >  1:756663/1‑147                    CAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGGCTCGCCGTCAGG                                                                                                                                          <  2:756663/147‑1                    CAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGG                                                                                                                                                       <  1:2012758/134‑1                    CAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGG                                                                                                                                                       >  2:2012758/1‑134                    CAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGATCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGGCTCGCCGTCAGGGTC                                                                                                                                       <  1:2186540/150‑1                            GTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACTCTCAACGCCCCGGTCGATGCCACCACCGCGACCCCAGCGGTCTCGCCGTCAGGGTCGCGGTGGT                                                                                                                               <  1:566355/150‑1                                    GTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGGCTCGCCGTCAGG                                                                                                                                          >  2:939311/1‑131                                    GTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGGCTCGCCGTCAGG                                                                                                                                          <  1:939311/131‑1                                        GCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGGCTCGCCGTCAGGG                                                                                                                                         >  2:1886089/1‑128                                        GCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGGCTCGCCGTCAGGG                                                                                                                                         <  1:1886089/128‑1                                         CGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGGCTCGCCGTCAGG                                                                                                                                          <  1:1564595/126‑1                                         CGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGGCTCGCCGTCAGG                                                                                                                                          >  2:1564595/1‑126                                                           CACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGGCTCGCCGTCAGG                                                                                                                                          >  2:2372890/1‑108                                                           CACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGGCTCGCCGTCAGG                                                                                                                                          <  1:2372890/108‑1                                                            ACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACG                                                                                                                                                        <  1:1758939/93‑1                                                            ACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACG                                                                                                                                                        >  2:1758939/1‑93                                                                                              CGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGGCTCGCCGTCAGGGTC                                                                                                                                       <  1:2084185/76‑1                                                                                              CGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGGCTCGCCGTCAGGGTC                                                                                                                                       >  2:2084185/1‑76                                                                                                          AGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGGCTCGCCGTCAGG                                                                                                                                          >  1:1421729/1‑61                                                                                                          AGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGGCTCGCCGTCAGG                                                                                                                                          <  2:1421729/61‑1                                                                                                                                                     GACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGGGCGTGGTGTGGGCCGGGGTCGGGCTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGATGGCGACGCTGACAGCCCAACCGTTGTTGTAGACG      >  2:1047752/1‑150                                                                                                                                                     GACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGATGGTGACGCTGACGGTCGAACCGTTGTTGTAGACG      >  1:359129/1‑150                                                                                                                                                     GACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGATGGTGACGCTGACGGTCGAACCGTTGTTGTAGACG      >  2:2442084/1‑150                                                                                                                                                     GACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGATGGTGACGCTGACGGTCGAACCGTTGTTG            <  1:1043666/144‑1                                                                                                                                                     GACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGATGGTGACGCTGACGGTCGAACCGTTGTTG            >  2:1043666/1‑144                                                                                                                                                     GACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGATGGTGACGCTGAC                            >  1:428051/1‑128                                                                                                                                                     GACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGATGGTGACGCTGAC                            <  2:428051/128‑1                                                                                                                                                      ACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGATGGTGGCGCTGACGGTCGAACAGTTGTTGTAGACGg     >  1:1931770/1‑149                                                                                                                                                      ACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGATGGTGACGCTGACGGTCGAACCGTTGTT             >  2:689590/1‑142                                                                                                                                                      ACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGATGGTGACGCTGACGGTCGAACCGTTGTT             <  1:689590/142‑1                                                                                                                                                      ACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGAT                                        <  2:1376897/115‑1                                                                                                                                                      ACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGAT                                        >  1:1376897/1‑115                                                                                                                                                      ACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGA                                         >  2:132661/1‑114                                                                                                                                                      ACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGA                                         <  1:132661/114‑1                                                                                                                                                      ACGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGGCGGGGTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGATGGTGACGCTGACAGTCGAACCGTTGTTGTAGACGT     >  2:2211469/1‑150                                                                                                                                                       CGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACC                                                                                                                     >  2:2348236/1‑37                                                                                                                                                       CGGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACC                                                                                                                     <  1:2348236/37‑1                                                                                                                                                        GGGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGATGGTGACGCTGACGGTCGAACCGTTGTTGTAGACGTCA   >  1:1799469/1‑150                                                                                                                                                         GGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGGTTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGATGGTGACGCTGACAGTCGAACCGTTGTTGTAGACGTCAT  >  2:1465755/1‑150                                                                                                                                                         GGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGGTCCGGGGTCAGTTGCTTGAAATTACCGCCTGTGTCGTTCTCGATAGTGACGCTGACAGTGGAACCGTTGCTGTAGACGTCAT  >  2:269416/1‑150                                                                                                                                                                                                                                                                                                                CCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/196998‑197150 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacggGCTCGCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCAGTTGCTCGAAATTACCGCCTGTGGCGTTCTCGATGGTGACGCTGACGGTCGAACCGTTGTTGTAGACGTCAT  <  NC_002947/197155‑197007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.