| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 205109 = | 36 (0.390) | 15 (0.170) | 5/242 | NT | 18.5% | coding (10615/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | 205721 = | 97 (1.070) | coding (11227/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
GGTGACGGTAGTGCTGACCGGGGTCTTGTCGAGTGTCAGTTGTTCGAACTTGCCGACATCCGCACCTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/205258‑205109‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGG > NC_002947/205721‑205869 GGTGACGGTAGTGCTGACCGGGGTCTTGTCGAGTGTCAGTTGTTCGAACTTGCCGACATCCGCACCTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCAC < 1:685621/150‑1 cTCGAACTTGCCGACATCCGCACCTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTGCCAACGTAGACGTTGTCCGGGGCAGTCACGGTGGCAGTACCCACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATC > 1:1587679/2‑150 TCGAACTTGCCGACATCCGCACCTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTGCCGACGTAGACGTTGTCCGGGGCAGTGACAGTGGCAGTACCCACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCA > 2:829079/1‑150 GACATCCGCACCTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGGACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTTATAACCTTGCCGGCC > 2:1323662/1‑150 TCCGCACCTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAAC < 2:968788/150‑1 ctcCAACGGTTGCGATCGACATCACGACAGGGTCGTTGGTGCCGACGTAGACGTTGTCCGGGGCAGTGACGGTAGCATTGCCCACAGTG‑CATTGACCTTCACGCTGAGTGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGT < 1:885656/147‑1 TCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTGCCGACGTAGACGTTGTCCGGGGCAGTGACAGTGGCAGTACCCACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCTAATGGCACCGTGG < 1:829079/150‑1 TCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGG < 1:1323662/150‑1 TCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGACCAACGGCACCTTGt < 2:874514/150‑2 CAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTGCCAACGTAGACGTTGTCCGGGGCAGTCACGGTGGCAGTACCCACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCTAATGGCACCGTGGG < 2:1587679/150‑1 ATCGATTTGATCACAGGGTCGTTGGTGCCGACGTAGACGTTGTCCGGGGCAGTGACAGTGGCAGTACCCACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGC < 1:1359742/124‑1 ATCGATTTGATCACAGGGTCGTTGGTGCCGACGTAGACGTTGTCCGGGGCAGTGACAGTGGCAGTACCCACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGC > 2:1359742/1‑124 AGGGTCGTTGGTGCCGACGTAGACGTTGTCCGGGGCAGTGACGGTAGCAGTGCCCACAGTG‑CATTGACCTTCACGCTGAGTGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTA > 1:41213/1‑133 AGGGTCGTTGGTGCCGACGTAGACGTTGTCCGGGGCAGTGACGGTAGCAGTGCCCACAGTG‑CATTGACCTTCACGCTGAGTGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTA < 2:41213/133‑1 TTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGCTGAGCGACGGCAAAACCGTCATCACCGT < 1:158249/98‑1 TTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGCTGAGCGACGGCAAAACCGTCATCACCGT > 2:158249/1‑98 CCACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCCACCGTTGA > 1:99886/1‑150 CCACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGA > 1:107509/1‑150 CCACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCG < 2:1259907/110‑1 CCACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCG > 1:1259907/1‑110 CACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAA > 1:878715/1‑150 CACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA < 2:2185168/132‑1 CACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA > 1:2185168/1‑132 CACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCG < 1:1245229/109‑1 CACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCG > 2:1245229/1‑109 cCAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAG < 1:989998/149‑1 ACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAG > 1:978021/1‑150 ACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGC < 2:208484/62‑1 ACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGC > 1:208484/1‑62 ACAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGCCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACGCTGTGATCAAATCGATCGCAACCGTTGAAG < 2:1407164/150‑1 CAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGG < 2:1346284/150‑1 GGTGACGGTAGTGCTGACCGGGGTCTTGTCGAGTGTCAGTTGTTCGAACTTGCCGACATCCGCACCTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/205258‑205109‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacAGTG‑CATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGG > NC_002947/205721‑205869 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |