New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 208935	NA (NA)	10 (0.110)	6/240	NT	8.4%	coding (14441/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 210247	113 (1.210)					coding (15753/26049 nt)	PP_0168	putative surface adhesion protein

CACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTggtgg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/208787‑208935 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGGTGTCGGTCACTTGAACCGAAGCCGCACCGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGG  <  NC_002947/210247‑210106                                                                                                                                                                                                                                                                                                     CACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTG                                                                                                                                               >  1:1298707/1‑150  ACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGG                                                                                                                                              <  2:559791/150‑1   CGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGT                                                                                                                                             <  2:726059/150‑1   CGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGT                                                                                                                                             <  2:652656/150‑1   CGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGT                                                                                                                                             <  1:2030630/150‑1   CGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGT                                                                                                                                             <  1:2170017/150‑1   CGCTGCGCAGCGCGATGACGTCTACAACGATGTTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCTACTGGTGCGACCTGCGAGAACCTCGATCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGT                                                                                                                                             <  2:243392/150‑1    GCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACTCCACTGGTGCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGTG                                                                                                                                            <  1:907947/150‑1    GCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGTG                                                                                                                                            <  1:1060364/150‑1    GCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGTG                                                                                                                                            <  2:748508/150‑1     CTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCCGGATGGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGTGG                                                                                                                                           <  1:1205518/150‑1     CTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGTGG                                                                                                                                           <  1:1189906/150‑1     CTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGTGG                                                                                                                                           <  2:1050356/150‑1                                                                                                                                    CGACACCACCGACGAAGTGGTGGTGTCGGTCACTTGAACCGAAGCCGCACCGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTG            >  1:1625892/1‑150                                                                                                                                     gatACCACCGACGAAGTGGTGGTATCGGTCACTTGAACCGAAGCCGCACCGCCCAGCTCGAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGC           >  2:1551056/4‑150                                                                                                                                     GACACCACCGACGAAGTGGTGGTGTCTGTCACTTGAACCGAAGCCGCACCGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGC           >  2:897311/1‑150                                                                                                                                     GACACCACCGACGAAGTGGTGGTGTCGGTCACTTGAACCGAAGCCGCACCGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCGGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGC           >  1:1429526/1‑150                                                                                                                                     GACACCACCGACGAAGTGGTGGTGTCGGTCACTTGAACCGAAGCCGCACCGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGC           >  1:2031727/1‑150                                                                                                                                      atACCACCGACGAAGTGGTGGTATCGGTCACTTGAACCGAAGCCGCACCGCCCAGCTCGAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCG          >  1:693285/3‑150                                                                                                                                      ACACCACCGACGAAGTGGTGGTGTCGGTCACTTGAACCGAAGCCGCACCGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCG          >  2:1651794/1‑150                                                                                                                                       CACCACCGACGAAGTGGTGGTGTCGGTCACTTGAACCGAAG                                                                                                                      >  2:1408343/1‑41                                                                                                                                       CACCACCGACGAAGTGGTGGTGTCGGTCACTTGAACCGAAG                                                                                                                      <  1:1408343/41‑1                                                                                                                                              GACGAAGTGGTGGTGTCGGTCACTTGAACCGAAGCCGCACCGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGG  <  2:2031727/150‑1                                                                                                                                                 GAAGTGGTGGTGTCGGTCACTTGAACCGAAGCCGCACCGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCAT                   <  1:853794/130‑1                                                                                                                                                 GAAGTGGTGGTGTCGGTCACTTGAACCGAAGCCGCACCGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCAT                   >  2:853794/1‑130                                                                                                                                                        TGGTGTCGGTCACTTGAACCGAAGCCGCACCGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGC           <  2:1248067/131‑1                                                                                                                                                        TGGTGTCGGTCACTTGAACCGAAGCCGCACCGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGC           >  1:1248067/1‑131                                                                                                                                                                                                                                                                                                     CACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTggtgg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/208787‑208935 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGGTGTCGGTCACTTGAACCGAAGCCGCACCGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGG  <  NC_002947/210247‑210106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.