| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 277165 = | 139 (1.490) | 14 (0.170) | 12/220 | NT | 10.9% | coding (3/1221 nt) | PP_0223 | DszC family monooxygenase |
| ? | NC_002947 | 277234 = | 106 (1.290) | intergenic (‑67/+30) | PP_0223/PP_0224 | DszC family monooxygenase/DszC family monooxygenase | |||||
AGTACCACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/277328‑277165‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgtgtcgcgatgGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTTCGCCAGTGGCG > NC_002947/277234‑277380 AGTACCACGCGGTGGGCGCTTACCACCTTAACGGCTCCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGC < 2:1694515/150‑1 ACCACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTT > 1:1219864/1‑150 ACCACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTT < 1:310493/150‑1 CACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGT > 1:604795/1‑150 CACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGT > 2:2267965/1‑150 CACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGT > 2:2000002/1‑150 ACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGGGCGGCCTTGTG > 2:1712325/1‑150 ACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTG > 2:2259829/1‑150 ACGCGGTGGGCACTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGCGCGCAGTTTCCTGTGGGAGCGGCCTTGTG > 1:593/1‑150 CGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGT < 1:1239233/150‑1 TGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGA < 1:822642/150‑1 TGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGA < 2:265134/150‑1 GCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATG < 1:1174958/124‑1 GCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATG > 2:1174958/1‑124 CTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGAT < 1:566142/108‑1 CTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGA > 1:2383324/1‑107 CTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGA < 2:2383324/107‑1 CTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGT < 2:1817139/100‑1 CTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGT > 1:1817139/1‑100 CTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGAAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGAT > 2:566142/1‑108 GCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGTGCCGCAAAGCGGCCCCAATGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGG > 1:2060065/1‑150 TGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCC > 2:884378/1‑68 TGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCC < 1:884378/68‑1 ATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGTGCCGCAAAGCGGCCCCAATGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCC < 2:2060065/150‑1 ATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTCGGCGCCGCCTTGTTTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCC > 1:1488251/1‑150 AGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTA > 1:2101906/1‑150 GTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAA > 2:733033/1‑131 GTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAA < 1:733033/131‑1 GTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAG < 2:344972/124‑1 GTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAG > 1:344972/1‑124 CTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGACCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCA > 1:925713/1‑150 CTCCCACAAGTAGAGCGCAGTTTCCTGTCGGAGCGGCCTTGTGTCGCGATGTGCTGTAAAGCAGCCCCCAGGTCCCGCAAACCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCA > 2:1254187/1‑150 TCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAG > 2:2293078/1‑150 GTAGAGCGCAGTTTCCTGTGGGAGCGACCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGT > 2:1631964/1‑116 GTAGAGCGCAGTTTCCTGTGGGAGCGACCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGT < 1:1631964/116‑1 GCAGTTTCCTGTGGGAGCGACCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGC < 2:925713/150‑1 CTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTT > 2:2315106/1‑150 CTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTT > 1:1113374/1‑150 TTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGT < 1:330278/135‑1 TTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGT > 2:330278/1‑135 GCGATGAGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTTCGCCAGTG < 1:2204621/150‑1 aGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGG > 1:503845/2‑123 aGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGG < 2:503845/122‑1 CGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTTCGACAGgat < 2:117109/150‑4 tggGGGCTGCTTTGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTTCGCCAGTGGC > 1:776613/4‑150 GATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCACGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTTCGCCAGTGGC > 1:651232/1‑150 ATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTTCGCCAGTGGCG < 1:1967223/150‑1 AGTACCACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/277328‑277165‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgtgtcgcgatgGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTTCGCCAGTGGCG > NC_002947/277234‑277380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |