New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 284699 | 108 (1.160) | 6 (0.070) | 6/240 | NT | 5.3% | coding (752/834 nt) | atsK | alpha‑ketoglutarate‑dependent sulfonate dioxygenase |
? | NC_002947 | = 284711 | 109 (1.220) | coding (740/834 nt) | atsK | alpha‑ketoglutarate‑dependent sulfonate dioxygenase |
CCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/284548‑284699 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggACAACCGCGTGACCCAGCATTTTGCGGTGGATGATTACCGACCGAACCGGCGGGTGATGCACCGGGCGACCATCCTTGGGGATGCACCTTTCTAGCGGTTGCCTGT‑CTGGCCTCTTCGCGGGCAAGCCCGCGAAGAGGCCAGGACAGG < NC_002947/284711‑284564 cagcgGACCAGGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTG < 1:1923841/145‑1 aGCTGAACAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGG > 2:2112000/2‑150 CAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCT < 1:1990920/141‑1 CAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCT > 2:1990920/1‑141 TTCGCGGGCAAGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTG > 1:1514632/1‑120 TTCGCGGGCAAGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTG < 2:1514632/120‑1 GTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTG < 1:1699533/73‑1 GTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTG > 2:1699533/1‑73 CCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGACAACCGCGTGACCCAGCA < 2:969405/86‑1 CCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGACAACCGCGTGACCCAGCA > 1:969405/1‑86 CAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGACAACCGCGTGACCCAGCATT < 1:630373/87‑1 CAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGACAACCGCGTGACCCAGCATT > 2:630373/1‑87 TCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGCATTTTGCGGTGGATGATTACCGACCGAACCGGCGGGTGATGCACCGGGCGACCATCCTTGGGGATGCACCTTTCTAGCGGTTGCCTGT > 2:1744134/1‑125 TCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGCATTTTGCGGTGGATGATTACCGACCGAACCGGCGGGTGATGCACCGGGCGACCATCCTTGGGGATGCACCTTTCTAGCGGTTGCCTGT < 1:1744134/125‑1 TGGGACAACCGCGTGACCCAGCATTTTGCGGTGGATGATTACCGACCGAACCGGCGGGTGATGCACCGGGCGACCATCCTTGGGGATGCACCTTTCTAGCGGTTGCCTGT‑CTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGacag < 1:716540/150‑5 GGACAACCGCGTGACCCAGCATTTTGCGGTGGATGATTACCGACCGAACCGGCGGGTGATGCACCGGGCGACCATCCTTGGGGATGCACCTTTCTAGCGGTTGCCTGTCCTGGCCTCTTCGCGGGCtt > 2:1394157/1‑126 GGACAACCGCGTGACCCAGCATTTTGCGGTGGATGATTACCGACCGAACCGGCGGGTGATGCACCGGGCGACCATCCTTGGGGATGCACCTTTCTAGCGGTTGCCTGTCCTGGCCTCTTCGCGGGCtt < 1:1394157/128‑3 GGACAACCGCGTGACCCAGCATTTTGCGGTGGATGATTACCGACCGAACCGGCGGGTGATGCACCGGGCGACCATCCTTGGGGATGCACCTTTCTAGCGGTTGCCTGT‑CTGGCCTCTTCGCGGGCAAGCCCGCGAAGAGGCCAGGACAGG > 1:919889/1‑150 GGACAACCGCGTGACCCAGCATTTTGCGGTGGATGATTACCGACCGAACCGGCGGGTGATGCACCGGGCGACCATCCTTGGGGATGCACCTTTCTAGCGGTTGCCTGT‑CTGGCCT > 1:952099/1‑115 GGACAACCGCGTGACCCAGCATTTTGCGGTGGATGATTACCGACCGAACCGGCGGGTGATGCACCGGGCGACCATCCTTGGGGATGCACCTTTCTAGCGGTTGCCTGT‑CTGGCCT < 2:952099/115‑1 CCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/284548‑284699 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggACAACCGCGTGACCCAGCATTTTGCGGTGGATGATTACCGACCGAACCGGCGGGTGATGCACCGGGCGACCATCCTTGGGGATGCACCTTTCTAGCGGTTGCCTGT‑CTGGCCTCTTCGCGGGCAAGCCCGCGAAGAGGCCAGGACAGG < NC_002947/284711‑284564 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |