New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 298448 = | 106 (1.140) | 6 (0.070) | 6/240 | NT | 5.9% | coding (94/384 nt) | PP_0244 | hypothetical protein |
? | NC_002947 | 298495 = | 90 (1.000) | coding (47/384 nt) | PP_0244 | hypothetical protein |
CCGGCCAACAACGCCATGGCCGCCCTGTTCGCCAACGCCAAGCAACTGAAGAAGAAGTAATGGACGTACCTCGCGAATACGTCGAAAGCGCCTTCAGCCAGCTGCTGGGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/298600‑298448 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGCGGTGGCGGTTTCGCGCTGACGCGGTGCCTGCTGCTGG > NC_002947/298495‑298643 cccGCCAAAAACGCCATAGTGGCTTTGTTCGCCAGCGCCAAGCAACTGAAGAAGCAGTAATGGACGTACCTCGCGAATACGTCGCAAGCGCCTTCAGCCAGCTGCTGGGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAG < 2:1098630/147‑1 GGCCAACAACGCCATGGCCGCCCTGTTCGCCAACGCCAAGCAACTGAAGAAGAAGTAATGGACGTACCTCGCGAATACGTCGAAAGCGCCTTCAGCCAGCTGCTGGGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCC < 1:1770959/150‑1 CGCCCTGTTCGCCAACGCCAAGCAACTGAAGAAGAAGTAATGGACGTACCTCGCGAATACGTCGAAAGCGCCTTCAGCCAGCTGCTGGGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAG > 1:1347711/1‑130 CGCCCTGTTCGCCAACGCCAAGCAACTGAAGAAGAAGTAATGGACGTACCTCGCGAATACGTCGAAAGCGCCTTCAGCCAGCTGCTGGGCTGCCGCCCGCAACACCTGGACAGCGGTGTTGCCGAGGTAG < 2:1347711/130‑1 CTTCAGCCAGCTGCTGGGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCCCTGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACACGGCGGC > 1:784791/1‑150 GGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCCCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCC > 2:561857/1‑150 CCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCCCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGC < 1:561857/150‑1 CTGGACAGCGGTGTTGCCGAGGTAGCCCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTG > 1:340123/1‑102 CTGGACAGCGGTGTTGCCGAGGTAGCCCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTG < 2:340123/102‑1 CGAGGTAGCCCTGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGCGGTGGCGGTTTCGTGCTGACGCGGTGC < 2:784791/150‑1 AGCCCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACGGGGCGGCCATGGCGTTGTTGGCCGGGGCTGCGGTGGCGGTTTCGCGCTGACGCGGTGCCTGCTG > 1:1497901/1‑150 CCCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGCGGTGGCGGTTTCGCGCTGACGCGGTGCCTGCTGCT < 1:99259/150‑1 CCCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGCGGTGGCGGTTTCGCGCTGACGCGGTGCCTGCTGCT > 1:998530/1‑150 CCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGCGGTGGCGGTTTCGCGCTGACGCGGTGCCTGCTGCTG > 2:942793/1‑150 CCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGC < 2:2235298/114‑1 CCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGC > 1:2235298/1‑114 CCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGGTGTTGGCCGGGGCTGCGGTGGCGGTTTCGCGCTGACGCGGTGCCTGCTGCTG > 2:1947008/1‑150 CAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGTCGTCGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGCGGTGGCGGTTTCGCGCTGACGCGGTGCCTGCTGCTGG > 1:1353692/1‑150 CCGGCCAACAACGCCATGGCCGCCCTGTTCGCCAACGCCAAGCAACTGAAGAAGAAGTAATGGACGTACCTCGCGAATACGTCGAAAGCGCCTTCAGCCAGCTGCTGGGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/298600‑298448 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGCGGTGGCGGTTTCGCGCTGACGCGGTGCCTGCTGCTGG > NC_002947/298495‑298643 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |