New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 317421 = | 94 (1.010) | 5 (0.060) | 5/236 | NT | 5.5% | coding (512/1407 nt) | dctD‑I | C4‑dicarboxylate transport transcriptional regulator |
? | NC_002947 | 317465 = | 84 (0.950) | coding (468/1407 nt) | dctD‑I | C4‑dicarboxylate transport transcriptional regulator |
CGACAGCGTGCGCCGCGCCCTGGCTTTGCGCCGGCTGGTGCTGGACAACCGTAGCCTGCGTCTGGCACTGAGCGACCGCCAGCAACTGGCAACCCGCCTGGTCGGCCATTCACCGGCCATGCTGCGCCTGCGCGAGCAGATCGGCGCTTTGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/317576‑317421 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccggTGAATG‑GCCGACCAGGCGGGTTGCCAGTTGCTGGCGGTCGCTCAGTGCCAGACGCAGGCTACGGTTGTCCAGCACCAGCCGGCGCAAAGCCAGGGCGCGGCGCACGCTGTCGAGCAGGGCGTCTGTGGCAAAGGGTTTTTCCAGGAAGT > NC_002947/317465‑317613 CGACAGCGTGCGCCGCGCCCTGGCTTTGCGCCGGCTGGTGCTGGACAACCGTAGCCTGCGTCTGGCACTGAGCGACCGCCAGCAACTGGCAACCCGCCTGGTCGGCCATTCACCGGCCATGCTGCGCCTGCGCGAGCAGATCGGCGCTTT > 2:1050526/1‑150 ACAGCGTGCGCCGCGCCCTGGCTTTGCGCCGGCTGGTGCTGGACAACCGTAGCCTGCGTCTGGCACTGAGCGACCGCCAGCAACTGGCAACCCGCCTGGTCGGCCATTCACCGGCCATGCTGCGCCTGCGCGAGCAGATCGGCGCTTTGG < 1:820670/150‑1 CAGCGTGCGCCGCGCCCTGGCTTTGCGCCGGCTGGTGCTGGACAACCGTAGCCTGCGTCTGGCACTGAGCGACCGCCAGCAACTGGCAACCCGCCTGGTCGGCCATTCACCGGCCATGCTGCGCCTGCGCGAGCAGATCGGCGCTTTGGC < 2:536407/150‑1 AGCGTGCGCCGCGCCCTGGCTTTGCGCCGGCTGGTGCTGGACAACCGTAGCCTGCGTCTGGCACTGAGCGACCGCCAGCAACTGGCAACCCGCCTGGTCGGCCATTCACCGGCCATGCTGCGCCTGCGCGAGCAGATCGGCGCTTTGGCC > 1:722916/1‑150 CCTGGCTTTGCGCCGGCTGGTGCTGGACAACCGTAGCCTGCGTCTGGCACTGAGCGACCGCCAGCAACTGGCAACCCGCCTGGTCGGCCATTCACCGGCCATGCTGCGCCTGCGCGAGCAGATCGGCGCTTTGGCCG < 1:1160853/137‑1 CCTGGCTTTGCGCCGGCTGGTGCTGGACAACCGTAGCCTGCGTCTGGCACTGAGCGACCGCCAGCAACTGGCAACCCGCCTGGTCGGCCATTCACCGGCCATGCTGCGCCTGCGCGAGCAGATCGGCGCTTTGGCCG > 2:1160853/1‑137 GCCTGGTCGGCCATTCACCGGCCATGCTGCGCCTGCGCGAGCAGATCGGCGCTTTGGCCGGCACCCGCGCCGACCAGGCGGGTTGCCAGTTGCTGGCGGTCGCTCAGTGCCAGACGCAGGCTACGGTTGTCCAGCACCAGCCGGCGCAAA > 2:850110/1‑150 CCATTCACCGGCCATGCTGCGCCTGCGCGAGCAGATCGGCGCTTTGGCCGGTGAATG‑GCCGACCAGGCGGGTTGCCAGTTGCTGGCGGTCGCTCAGTGCCAGACGCAGGCTACGGTTGTCCAGCACCAGCCGGCGCAAAGCCAGGGCGCG > 1:952321/1‑150 CGGCCATGCTGCGCCTGCGCGAGCAGATCGGCGCTTTGGCCGGTGAATG‑GCCGACCAGGCGGGTTGCCAGTTGCTGGCGGTCGCTCAGTGCCAGACGCAGGCTACGGTTGTCCAGCACCAGCCGGCGCAAAGCCAGGGCGCGGC < 2:821961/144‑1 CGGCCATGCTGCGCCTGCGCGAGCAGATCGGCGCTTTGGCCGGTGAATG‑GCCGACCAGGCGGGTTGCCAGTTGCTGGCGGTCGCTCAGTGCCAGACGCAGGCTACGGTTGTCCAGCACCAGCCGGCGCAAAGCCAGGGCGCGGC > 1:821961/1‑144 GCCATGCTGCGCCTGCGCGAGCAGAAAGCTACTTTGGCCGGTGAATG‑GCCGACCAGGCGGGTTGCCAGTTGCTGGCGGTCGCTCAGTGCCAGACGCAGGCTACGGTTGTCCAGCACCAGCCGGCGCAAAGCCAGGGCGCGGCGCACGCTG > 1:1243877/1‑150 TGGCCGGTGAATG‑TCCGACCAGGCGGGTTGCCAGTTGCTGGCGGTCGCTCAGTGCCAGACGCAGGCTACGGTTGTCCAGCACCAGCCGGCGCAAAGCCAGGGCGCGGCGCACGCTGTCGAGCAGGGCGTCTGTGGCAAAGGGTTTTTCCA < 2:1293489/150‑1 TGGCCGGTGAATG‑GCCGACCAGGCGGGTTGCCAGTTGCTGGCGGTCGCTCAGTGCCAGACGCAGGCTACGGTTGTCCAGCACCAGCCGGCGCAAAGCCAGGGCGCGGCGCACGCTGTCGAGCAGGGCGTCTGTGGCAAAGGGTTTTTCCA < 2:582718/150‑1 TGGCCGGTGAATG‑GCCGACCAGGCGGGTTGCCAGTTGCTGGCGGTCGCTCAGTGCCAGACGCAGGCTACGGTTGTCCAGCACCAGCCGGCGCAAAGCATGGGCGCGGCGCACGCTGTCGAGCAGGGCGTCTGTGGCAAAGGGTTTTTCCA < 1:61379/150‑1 GGCCGGTGAATG‑GCCGACCAGGCGGGTTGCCAGTTGCTGGCGGTCGCTCAGTGCCAGACGCAGGCTACGGTTGTCCAGCACCAGCCGGCGCAAAGCCAGGGCGCGGCGCACGCTGTCGAGCAGGGCGTCTGTGGCAAAGGGTTTTTCCAG < 2:899052/150‑1 GCCGGTGAATG‑GCCGACCAGGCGGGTTGCCAGTTGCTGGCGGTCGCTCAGTGCCAGACGCAGG > 2:2160544/1‑63 GCCGGTGAATG‑GCCGACCAGGCGGGTTGCCAGTTGCTGGCGGTCGCTCAGTGCCAGACGCAGG < 1:2160544/63‑1 CCGGTGAATG‑GCCGACCAGGCGGGTTGCCAGTTGCTGGCGGTCGCTCAGTGCCAGACGCAGGCTACGGTTGTCCAGCACCAGCCGGCGCAAAGCCAGGGCGCGGCGCACGCTGTCGAGCAGGGCGTCTGTGGCAAAGGGTTTTTCCAGGA > 2:1746531/1‑150 GGTGAATG‑GCCGACCAGGCGGGTTGCCAGTTGCTGGCGGTCGCTCAGTGCCAGACGCAGGCTACGGTTGTCCAGCACCAGCCGGCGCAAAGCCAGGGCGCGGCGCACGCTGTCGAGCAGGGCGTCTGTGGCAAAGGGTTT < 2:1162582/140‑1 GGTGAATG‑GCCGACCAGGCGGGTTGCCAGTTGCTGGCGGTCGCTCAGTGCCAGACGCAGGCTACGGTTGTCCAGCACCAGCCGGCGCAAAGCCAGGGCGCGGCGCACGCTGTCGAGCAGGGCGTCTGTGGCAAAGGGTTT > 1:1162582/1‑140 GTGAATG‑GCCGACCAGGCGGGTTGCCAGTTGCTGGCGGTCGCTCAGTGCCAGACGCAGGCTACGGTTGTCCAGCACCAGCCGGCGCAAAGCCAGGGCGCGGCGCACGCTGTCGAGCAGGGCGTCTGTGGCAAAGGGTTTTTCCAGGAAGT < 1:732220/150‑1 CGACAGCGTGCGCCGCGCCCTGGCTTTGCGCCGGCTGGTGCTGGACAACCGTAGCCTGCGTCTGGCACTGAGCGACCGCCAGCAACTGGCAACCCGCCTGGTCGGCCATTCACCGGCCATGCTGCGCCTGCGCGAGCAGATCGGCGCTTTGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/317576‑317421 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccggTGAATG‑GCCGACCAGGCGGGTTGCCAGTTGCTGGCGGTCGCTCAGTGCCAGACGCAGGCTACGGTTGTCCAGCACCAGCCGGCGCAAAGCCAGGGCGCGGCGCACGCTGTCGAGCAGGGCGTCTGTGGCAAAGGGTTTTTCCAGGAAGT > NC_002947/317465‑317613 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |