New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 726912 | 79 (0.850) | 6 (0.070) +TT |
6/246 | NT | 7.3% | intergenic (‑156/+111) | PP_0620/PP_0621 | GntR family transcriptional regulator/hypothetical protein |
? | NC_002947 | 5571473 = | 77 (0.830) | intergenic (+44/+97) | queG/yicG | epoxyqueuosine reductase/inner membrane protein |
TTTTTCATATTTATGCGGATAAATAGGATTTAGCGAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/726764‑726912 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTC > NC_002947/5571473‑5571537 || TTTTTCATATTTATGCGGATAAATAGGATTTAGCGAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGCATCAACTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAGTTGGCGATAAAAACTGGGGGAGCGGGCT > 1:747632/1‑150 ATAGGATTTAGCGAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCACCACg > 1:427688/1‑149 GCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCG < 2:427688/150‑1 CGGACGGGTCAATGCTGGCGGGGGGGCCGTTTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCG > 1:1638542/1‑150 CAATGCTGGCGGGGGGGGGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCCGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCG < 2:747632/150‑1 GGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAATCTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGC < 2:486110/150‑1 GGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTC < 2:1638542/150‑1 || TTTTTCATATTTATGCGGATAAATAGGATTTAGCGAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/726764‑726912 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTC > NC_002947/5571473‑5571537 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |