| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 836215 | 79 (0.850) | 9 (0.110) | 7/228 | NT | 10.7% | intergenic (‑134/+43) | PP_0718/ychF | sulfate transporter/ribosome‑associated potassium‑dependent ATP/GTPase |
| ? | NC_002947 | = 836225 | 78 (0.920) | intergenic (‑144/+33) | PP_0718/ychF | sulfate transporter/ribosome‑associated potassium‑dependent ATP/GTPase | |||||
GTCGAAACGAGTGGGTTGGGGCATGGTGTCGGCTCTGGGCGAGAAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/836058‑836215‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaccccttgaGGCTTGCGCTTCAAGGGGTTTTGTTTTGCCCAGACATGCGCGCCCTTGGCAGGGGCGGCCTTGCGTCGTGCCAGGCCGCAAAGCGGCCCCCGCCTTCAGCATCTAAGCTGAGGTTCAGCGCCCTTCTCGCCCAGAGCCGACACCATGCC < NC_002947/836225‑836077 GTCGAAACGAGTGGGTTGGGGCATGGTGTCGGCTCTGGGCGAGAAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAA < 1:599191/150‑1 GAAACGAGTGGGTTGGGGCATGGTGTCGGCTCTGGGCGAGAAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCC < 2:2059970/150‑1 GTGTCGGCTCTGGGCGAGAAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAGGCTTGCGCTTCAAGGG < 2:257581/150‑1 TCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAGGCTTGCGCTTCAAGGG > 2:2294880/1‑118 TCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAGGCTTGCGCTTCAAGGG < 1:2294880/118‑1 CAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGGATGTCTGGGCAAAACAAAACCCCTTGAGGCTTGCGCTTCAAGGGG < 2:939020/118‑1 CAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGGATGTCTGGGCAAAACAAAACCCCTTGAGGCTTGCGCTTCAAGGGG > 1:939020/1‑118 GACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAGGCTTGCGCTTCAAGGG < 2:121054/74‑1 GACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAGGCTTGCGCTTCAAGGG > 1:121054/1‑74 CAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTTGTTTTGCCCAGACATGCGCGCCCTTGGCAGGGGCGGCCTTGCGTCGTGCCAGGC > 1:1339177/1‑94 CAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTTGTTTTGCCCAGACATGCGCGCCCTTGGCAGGGGCGGCCTTGCGTCGTGCCAGGC < 2:1339177/94‑1 ACAAAACCCCTTGAGGCTTGCGCTTCAAGGGGTTTTGT < 1:99536/38‑1 ACAAAACCCCTTGAGGCTTGCGCTTCAAGGGGTTTTGT > 2:99536/1‑38 AACCCCTTGAGGCTTGCGCTTCAAGGGGTTTTGTTTTGCCCAGACATGCGCGCCCTTGGCAGGGGCGGCCTTGCGTCGTGCCAGGCCGCAAAGCGGCCCCCGCCTTCAGCATCTAAGCTGAGGTTCAGCGCCCTTCTCGCCCAGAGCCGA < 1:2352203/150‑1 ACCCCTTGAGGCTTGCGCTTCAAGGGGTTTTGTTTTGCCCAGACGTGCGCGCCCTTGGCAGGGGCGGCCTTGCGTCGTGCCAGGCCGCAAAGCGGCCCCCGCCTTCAGCATCTAAGCTGAGGTTCAGCGCCCTTCTCGCCCAGAGCCGAC < 1:1680182/150‑1 ACCCCTTGAGGCTTGCGCTTCAAGGGGTTTTGTTTTGCCCAGACATGCGCGCCCTTGGCAGGGGCGGCCTTGCGTCGTGCCAGGCCGCAAAGCGGCCCCCGCCTTCAGCATCTAAGCTGAGGTTCAGCGCCCTTCTCGCCCAGAGCCGAC > 1:1323673/1‑150 CCCCTTGAGGCTTGCGCTTCAAGGGGTTTTGTTTTGCCCAGACATGCGCGCCCTTGGCAGGGGCGGCCTTGCGTCGTGCCAGGCCGCAAAGCGGCCCCCGCCTTCAGCATCTAAGCTGAGGTTCAGCGCCCTTCTCGCCCAGAGCCGACc > 1:2241167/1‑149 CCCTTGAGGCTTGCGCTTCAAGGGGTTTTGTTTTGCCCAGACATGCGCGCCCTTGGCAGGGGCGGCCTTGCGTCGTGCCAGGCCGCAAAGCGGCCCCCGCCTTCAGCATCTAAGCTGAGGTTCAGCGCCCTTCTCGCCCAGAGCCGACAC > 1:261617/1‑150 CCCTTGAGGCTTGCGCTTCAAGGGGTTTTGTTTTGCCCAGACATGCGCGCCCTTGGCAGGGGCGGCCTTGCGTCGTGCCAGGCCGCAAAGCGGCCCCCGCCTTCAGCATCTAAGCTGAGGTTCAGCGCCCTTCTCGCCCAGAGCCGACAC > 2:1684882/1‑150 CCTTGAGGCTTGCGCTTCAAGGGGTTTTGTTTTGCCCAGACATGCGCGCCCTTGGCAGGGGCGGCCTTGCGTCGTGCCAGGCCGCAAAGCGGCCCCCGCCTTCAGCATCTAAGCTGAGGTTCAGCGCCCTTCTCGCCCAGAGCCGACACC < 2:1595210/150‑1 TTGAGGCTTGCGCTTCAAGGGGTTTTGTTTTGCCCAGACATGCGCGCCCTTGGCAGGGGCGGCCTTGCGTCGTGCCAGGCCGCAAAGCGGCCCCCGCCTTCAGCATCTAAGCTGAGGTTCAGCGCCCTTCTCGCCCAGAGCCGACACCAT < 2:1762730/150‑1 TTGAGGCTTGCGCTTCAAGGGGTTTTGTTTTGCCCAGACATGCGCGCCCTTGGCAGGGGCGGCCTTGCGTCGTGCCAGGCCGCAAAGCGGCCCCC < 2:162891/95‑1 TTGAGGCTTGCGCTTCAAGGGGTTTTGTTTTGCCCAGACATGCGCGCCCTTGGCAGGGGCGGCCTTGCGTCGTGCCAGGCCGCAAAGCGGCCCCC > 1:162891/1‑95 AGGCTTGCGCTTCAAGGGGTTTTGTTTTGCCCAGACATGCGCGCCCTTGGCAGGGGCGGCCTTGCGTCGTGCCAGGCCGCAAAGCGGCCCCCGCCTTCAGCATCTAAGCTGAGGTTCAGCGCCCTTCTCGCCCAGAGCCGACACCATGCC < 1:882577/150‑1 GTCGAAACGAGTGGGTTGGGGCATGGTGTCGGCTCTGGGCGAGAAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/836058‑836215‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaccccttgaGGCTTGCGCTTCAAGGGGTTTTGTTTTGCCCAGACATGCGCGCCCTTGGCAGGGGCGGCCTTGCGTCGTGCCAGGCCGCAAAGCGGCCCCCGCCTTCAGCATCTAAGCTGAGGTTCAGCGCCCTTCTCGCCCAGAGCCGACACCATGCC < NC_002947/836225‑836077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |