| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 867938 = | 102 (1.090) | 9 (0.110) | 8/220 | NT | 9.6% | intergenic (+33/+144) | PP_0750/mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| ? | NC_002947 | 867998 = | 79 (0.960) | intergenic (+93/+84) | PP_0750/mqo‑I | hypothetical protein/malate:quinone oxidoreductase | |||||
CAAGCACTACGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/868097‑867938‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCG > NC_002947/867998‑868142 CAAGCACTCCGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGT < 2:1316288/150‑1CAAGCACTACGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGT > 2:637339/1‑150 AAGCACTACGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTG < 1:772394/150‑1 AAGCACTACGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTG > 1:2416229/1‑150 ACTACGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAG < 2:2328369/150‑1 TACGCTTACGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCG < 1:126947/150‑1 TACGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCG > 1:8904/1‑150 ACGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGG < 2:1543521/150‑1 ACGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGG < 1:2107110/150‑1 TTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGC > 2:802967/1‑148 TTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGC < 1:802967/148‑1 CTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTC < 1:7649/80‑1 CTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTC > 2:7649/1‑80 GCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCATACCGGCTTAAGCGTAG > 2:551608/1‑150 TCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTG > 2:1347357/1‑150 CACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑CTTTTGCGTTTCTGATCGGCTTAAGCGTAGTGCTT > 2:1722478/1‑150 ACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTG > 2:535383/1‑150 GTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGCGCGACCGCGAAGAGGCCGGCACTGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCC > 1:1635093/1‑150 TCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGC > 1:2056384/1‑115 TCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGC < 2:2056384/115‑1 TGCGGCGCGACTCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAG < 1:1347357/150‑1 TGCGGCGCGACTCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAAACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAG < 1:551608/150‑1 CCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGC < 1:1976918/150‑1 CTGTGGGAGCGGGGATGCCCGCGAAGAGGGCGGTCCAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGACG‑CTTTTGCGTGTCAGACCGGCTTAAGCGTAGTGCTTGGTAGCCGGCCTGCTCTCTGCCAGGTCCAGGGCCGCG > 2:602167/1‑150 CTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGTCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTG < 1:210525/133‑1 CTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACGAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTG > 2:210525/1‑133 GTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGgctt < 2:772394/150‑5 TGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAA < 2:988180/99‑1 TGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAA > 1:988180/1‑99 ttcGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTT > 1:798043/4‑150 ttcGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGG < 2:2295240/68‑1 ttcGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGG > 1:2295240/4‑71 gGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAACCGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTAT < 1:1722478/149‑1 AGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTAT < 1:214726/150‑1 GCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATC < 2:2107110/150‑1 CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCG < 1:1851353/150‑1 GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGG > 1:639744/1‑105 GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGG < 2:639744/105‑1 CAAGCACTACGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/868097‑867938‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCG > NC_002947/867998‑868142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |