New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 106499393 (1.000)19 (0.230) 10/224 NT 16.8% intergenic (+47/+66) PP_0922/PP_0923 hypothetical protein/acyltransferase
?NC_002947 = 1065009 105 (1.260)intergenic (+63/+50) PP_0922/PP_0923 hypothetical protein/acyltransferase

CCGGGGTGATGGTGGAACTGGAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1064834‑1064993
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTAGAACTCGCGAAAATCCGCCAGCAGCGGC  <  NC_002947/1065009‑1064868
                                                                                                                                                                                                                                                                                                              
CCGGGGTGATGGTGGAACTGGAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAAC                                                                                                                                                          <  2:1835787/150‑1
 CGGGGTGATGGTGGAACTGGAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACC                                                                                                                                                         >  2:2344142/1‑150
 CGGGGTGATGGTGGAACTGGAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACC                                                                                                                                                         <  1:2344142/150‑1
    GGTGATGGTGGAACTGGAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGC                                                                                                                                                      <  2:892452/150‑1
                    GAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGC                                                                                                                                                      >  2:1534939/1‑134
                    GAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGC                                                                                                                                                      <  1:1534939/134‑1
                               TGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACACCGAGCGCATTGCCCGT                                                                                                                              <  2:1088247/147‑1
                               TGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACACCGAGCGCATTGCCCGT                                                                                                                              >  1:1088247/1‑147
                                                    TCGCGAGTTCTACGCGCAGCTGGAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGTGTGATACTGGCCTCTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAG                                                                                                      <  2:861935/150‑1
                                                                CCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTA                                                                                                                 >  2:163504/1‑127
                                                                CCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTA                                                                                                                 <  1:163504/127‑1
                                                                CCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGG                                                                                                                      >  1:2265825/1‑122
                                                                CCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGG                                                                                                                      <  2:2265825/122‑1
                                                                 CCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCC                                                                                                              <  1:1727648/129‑1
                                                                 CCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCC                                                                                                              >  2:1727648/1‑129
                                                                 CCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGG                                                                                                                      >  1:266760/1‑121
                                                                 CCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGG                                                                                                                      <  2:266760/121‑1
                                                                        TGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGG                                                                                                                     <  2:1340622/115‑1
                                                                        TGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGG                                                                                                                     >  1:1340622/1‑115
                                                                                                   TGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGG                                                                                                                     <  2:2150231/88‑1
                                                                                                   TGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGG                                                                                                                     >  1:2150231/1‑88
                                                                                                     TCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGG                                                                                                                      <  2:2365716/85‑1
                                                                                                     TCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGG                                                                                                                      >  1:2365716/1‑85
                                                                                                               AGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACACCTAGCGCATTGCCCGTAGGAGCGG                                                                                                                      <  2:2087701/75‑1
                                                                                                               AGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACACCTAGCGCATTGCCCGTAGGAGCGG                                                                                                                      >  1:2087701/1‑75
                                                                                                                                                   AACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTAGAACTCGCGAAAATCCGCCAGCA       <  2:724416/150‑1
                                                                                                                                                   AACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTAGAACTCGCGAAAATCCGCCAGCA       <  2:2216053/150‑1
                                                                                                                                                     CCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTAGAACTCGCGAAAATCCGCCAGCAGC     >  1:251925/1‑150
                                                                                                                                                     CCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTAGAACTCGCGAAAATCCGCCAGCAGC     >  2:1608986/1‑150
                                                                                                                                                     CCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTAGAACTCGCGAAAATCCGCCAGCAGC     >  1:2424882/1‑150
                                                                                                                                                      CCGCTCCTACGCCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTAGAACTCGCGAAAATCC              >  2:344591/1‑140
                                                                                                                                                      CCGCTCCTACGCCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTAGAACTCGCGAAAATCC              <  1:344591/140‑1
                                                                                                                                                      CCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGGAGACGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCC                                                     <  1:1356873/101‑1
                                                                                                                                                      CCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCC                                                     <  1:1355709/101‑1
                                                                                                                                                      CCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCC                                                     >  2:1356873/1‑101
                                                                                                                                                      CCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCC                                                     >  2:1355709/1‑101
                                                                                                                                                      CCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCAACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGGAGAACTCGCGAAAATCCGCCAGCAGCG    >  1:1083538/1‑150
                                                                                                                                                        GCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTAGAACTCGCGAAAATCCGCCAGCAGCGGC  <  1:449782/150‑1
                                                                                                                                                        GCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTAGAACTCGCGAAAATCCGCCAGCAGCGGC  <  1:1684920/150‑1
                                                                                                                                                        GCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTAGAACTCGCGAAAATCCGC            >  2:1553860/1‑140
                                                                                                                                                        GCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTAGAACTCGCGAAAATCCGC            <  1:1553860/140‑1
                                                                                                                                                            CTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGC                                                              <  2:1892769/86‑1
                                                                                                                                                            CTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGC                                                              >  1:1892769/1‑86
                                                                                                                                                                                                                                                                                                              
CCGGGGTGATGGTGGAACTGGAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1064834‑1064993
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTAGAACTCGCGAAAATCCGCCAGCAGCGGC  <  NC_002947/1065009‑1064868

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.