| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1119766 = | 88 (0.940) | 11 (0.120) | 10/236 | NT | 11.8% | coding (498/1494 nt) | pepA | cytosol aminopeptidase |
| ? | NC_002947 | 1119787 = | 81 (0.920) | coding (477/1494 nt) | pepA | cytosol aminopeptidase | |||||
TCGCGGTCAGCAACCGCGACGCCCATTACGGCAAGTACCGCCTGCTGGCCGAAACCCTGCTGGACGGCGAATATGTGTTCGACCGTTTCAAGAGCCAGAAAGCAGAGCCGCGCGCGCTGAAAAAGGTCACCCTGCTGGCCGACAAAGCCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1119920‑1119766‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccagCAGGGTGACCTTTTTCAGCGCGCGCGGCTCTGCTTTCTGGCTCTTGAAACGGTCGAACACATATTCGCCGTCCAGCAGGGTTTCGGCCAGCAGGCGGTACTTGCCGTAATGGGCGTCGCGGTTGCTGACCGCGATATCGTCCAGGGCCA > NC_002947/1119787‑1119935 TCGCGGTCAGCAACCGCGACGCCCATTACGGCAAGTACCGCCTGCTGGCCGAAACCCTGCTGGACGGCGAATATGTGTTCGACCGTTTCAAGAGCCAGAAAGCAGAGCCGCGCGCGCTGAAAAAGGTCACCCTGCTGGCCGACAAAGCCG < 1:1428881/150‑1TCGCGGTCAGCAACCGCGACGCCCATTACGGCAAGTACCGCCTGCTGGCCGAAACCCTGCTGGACGGCGAATATGTGTTCGACCGTTTCAAGAGCCAGAAAGCAGAGCCGCGCGCGCTGAAAAAGGTCACCCTGCTGGCCGACAAAGCCG > 1:1978407/1‑150TCGCGGTCAGCAACCGCGACGCCCATTACGGCAAGTACCGCCTGCTGGCCGAAACCCTGCTGGACGGCGAATATGTGTTCGACCGTTTCAAGAGCCAGAAAGCAGAGCCGCGCGCGCTGAAAAAGGTCACCCTGCTGGCCGACAAAGCCG > 1:610902/1‑150 GCGGTCAGCAACCGCGACGCCCATTACGGCAAGTACCGCCTGCTGGCCGAAACCCTGCTGGACGGCGAATATGTGTTCGACCGTTTCAAGAGCCAGAAAGCAGAGCCGCGCGCGCTGAAAAAGGTCACCCTGCTGGCCGACAAAGCCGGC < 2:2428535/150‑1 GGTCAGCAACCGCGACGCCCATTACGGCAAGTACCGCCTGCTGGCCGAAACCCTGCTGGACGGCGAATATGTGTTCGACCGTTTCAAGAGCCAGAAAGCAGAGCCGCGCGCGCTGAAAAAGGTCACCCTGCTGGCCGACAAAGCCGGCCA > 2:1789471/1‑150 GACGGCGAATATGTGTTCGACCGTTTCAAGAGCCAGAAAGCAGAGCCGCGCGCGCTGAAAAAGGTCACCCTGCTGGCCGACAAAGCCG > 1:189056/1‑88 GACGGCGAATATGTGTTCGACCGTTTCAAGAGCCAGAAAGCAGAGCCGCGCGCGCTGAAAAAGGTCACCCTGCTGGCCGACAAAGCCG < 2:189056/88‑1 GAATATGTGTTCGACCGTTTCAAGAGCCAGAAAGCAGAGCCGCGCGCGCTGAAAAAGGTCACCCTGCTGGCCGGCTTTGTCGGCCAGCAGGGT > 1:1560922/1‑93 GAATATGTGTTCGACCGTTTCAAGAGCCAGAAAGCAGAGCCGCGCGCGCTGAAAAAGGTCACCCTGCTGGCCGGCTTTGTCGGCCAGCAGGGT < 2:1560922/93‑1 GCCAGAAAGCAGAGCCGCGCGCGCTGAAAAAGGTCACCCTGCTGGCCGGCTTTGTCGGCCAGCAGGGT < 1:1172611/68‑1 GCCAGAAAGCAGAGCCGCGCGCGCTGAAAAAGGTCACCCTGCTGGCCGGCTTTGTCGGCCAGCAGGGT > 2:1172611/1‑68 CCTGCTGGCCGACAAAGCCGGCCAGCAGGGTGACCTTTTTCAGCGCGCGCGGCTCTGCTTTCTGGCTCTTGAAACGGTCGAACACATATTCGCCGTCCAGCAGGGTTTCGGCCAGCAGGCGGTACTTGCCGTAATGGGCGTCGCGGTTGC > 1:502289/1‑150 TGCTGGCCGACAAAGCCGGCCAGCAGGGTGACCTTTTTCAGCGCGCGCGGCTCTGCTTTCTGGCTCTTGAAACGGTCGAACACATATTCGCCGTCCAGCAGGGTTTCGGCCAGCAGGCGGTACTTGCCGTAATGGGCGTCGCGGTTGCTG > 1:991230/1‑150 TGGCCGACAAAGCCGGCCAGCAGGGTGACCTTTTTCAGCGCGCGCGGCTCTGCTTTCTGGCTCTTGAAACGGTCGAACACATATTCGCCGTCCAGCAGGGTTTCGGCCAGCAGGCGGTACTTGC > 1:977096/1‑124 TGGCCGACAAAGCCGGCCAGCAGGGTGACCTTTTTCAGCGCGCGCGGCTCTGCTTTCTGGCTCTTGAAACGGTCGAACACATATTCGCCGTCCAGCAGGGTTTCGGCCAGCAGGCGGTACTTGC < 2:977096/124‑1 GGCCGACAAAGCCGGCCAGCAGGGTGACCTTTTTCAGCGCGCGCGGCTCTGCTTTCTGGCTCTTGAAACGGTCGAACACATATTCGCCGTCCAGCAGGGTTTAGG < 1:720726/105‑1 GGCCGACAAAGCCGGCCAGCAGGGTGACCTTTTTCAGCGCGCGCGGCTCTGCTTTCTGGCTCTTGAAACGGTCGAACACATATTCGCCGTCCAGCAGGGTTTAGG > 2:720726/1‑105 GCCGACAAAGCCGGCCAGCAGGGTGACCTTTTTCAGCGCGCGCGGCTCTGCTTTCTGGCTCTTGAAACGGTCGAACACATATTCGCCGTCCAGCAGGGTTTCGGCCAGCAGGCGGTACTTGCCGTAATGGGCGTCGCGGTTGCTGACCGC < 2:502289/150‑1 CGGCCAGCAGGGTGACCTTTTTCAGCGCGCGCGGCTCTGCTTTCTGGCTCTTGAAACGGTCGAACACATATTCGCCGTCCAGCAGGGTTTCGGCCAGCAGGCGGTACTTGCCGTAATGGGCGTCGCGGTTGCTGACCGCGATATCGTCCA < 1:184973/150‑1 CGGCCAGCAGGGTGACCTTTTTCAGCGCGCGCGGCTCTGCTTTCTGGCTCTTGAAACGGTCGAACACATATTCGCCGTCCAGCAGGGTTTCCTCCAGCAGGCGTTACTTGCCGTAATGGGCGTCGCGGTTGCTGACCGCGATATCGTCCA < 2:584919/150‑1 GCCAGCAGGGTGACCTTTTTCAGCGCGCGCGGCTCTGCTTTCTGGCTCTTGAAACGGTCGAACACATATTCGCCGTCCAGCAGGGTTTCGGCCAGCAGGCGGTACTTGCCGTAATGGGCGTCGCGGTTGCTGACCGCGATATCGTCCAGG < 1:1136437/150‑1 GCCAGCAGGGTGACCTTTTTCAGCGCGCGCGGCTCTGCTTTCTGGCTCTTGAAACGGTCGAACACATATTCGCCGTCCAGCAGGGTTTCGGCCAGCAGGCGGTACTTGCCGTAATGGGCGTCGCGGTTGCTGACCGCGATATCGTCCAGG > 2:1700212/1‑150 GCCAGCAGGGTGACCTTTTTCAGCGCGCGCGGCTCTGCTTTCTGGCTCTTGAAACGGTCGAACACATATTCGCCGTCCAGCAGGGTTTCGGCCAGCAGGCGGTACTTGCCGTAATGGGCGTCGCGGTTGCTGACCGCGATATCGTCCAGG < 1:2279839/150‑1 GCAGGGTGACCTTTTTCAGCGCGCGCGGCTCTGCTTTCTGGCTCTTGAAACGGTCGAACACATATTCGCCGTCCAGCAGGGTTTCGGCCAGCAGGCGGTACTTGCCGTAATGGGCGTCGCGGTTGCTGACCGCGATATCGTCCAGGGCCA < 2:1118748/150‑1 GCAGGGTGACCTTTTTCAGCGCGCGCGGCTCTGCTTTCTGGCTCTTGAAACGGTCGAACACATATTCGCCGTCCAGCAGGGTTTCGGCCAGCAGGCGGTACTTGCCGTAATGGGCGTCGCGGTTGCTGACCGCGATATCGTCCAGGGCCA < 2:1132339/150‑1 TCGCGGTCAGCAACCGCGACGCCCATTACGGCAAGTACCGCCTGCTGGCCGAAACCCTGCTGGACGGCGAATATGTGTTCGACCGTTTCAAGAGCCAGAAAGCAGAGCCGCGCGCGCTGAAAAAGGTCACCCTGCTGGCCGACAAAGCCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1119920‑1119766‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccagCAGGGTGACCTTTTTCAGCGCGCGCGGCTCTGCTTTCTGGCTCTTGAAACGGTCGAACACATATTCGCCGTCCAGCAGGGTTTCGGCCAGCAGGCGGTACTTGCCGTAATGGGCGTCGCGGTTGCTGACCGCGATATCGTCCAGGGCCA > NC_002947/1119787‑1119935 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |