New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1126598 =	44 (0.470)	18 (0.230)	12/208	NT	31.4%	intergenic (‑47/+103)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
	?	NC_002947	1126656 =	42 (0.540)					intergenic (‑105/+45)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase

CAACGTGTTCGGCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1126767‑1126598 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcattcgcgggtaaacccgcTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTT  >  NC_002947/1126656‑1126796                                                                                                                                                                                                                                                                                                                         CAACGTGTTCGGCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCATGACGCCTGATAGGTCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCC                                                                                                                                                                   <  1:1223009/150‑1          CGGCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCG                                                                                                                                                          <  1:1858202/150‑1           GGCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGG                                                                                                                                                         <  1:1282343/150‑1           GGCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGG                                                                                                                                                         <  2:1574561/150‑1           GGCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGG                                                                                                                                                         <  2:1447630/150‑1            GCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGG                                                                                                                                                        >  2:203299/1‑150                                                              GCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAA                                                                                                                                                    >  2:1780385/1‑104                                                              GCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAA                                                                                                                                                    <  1:1780385/104‑1                                                                                    CTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGG                                                                                                                                                        >  2:528097/1‑78                                                                                    CTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGG                                                                                                                                                        <  1:528097/78‑1                                                                                    CTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGG                                                                                                                                                         <  1:1410394/77‑1                                                                                    CTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGG                                                                                                                                                         >  2:1410394/1‑77                                                                                                        TGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGC                                                                                                                                               <  2:2261818/67‑1                                                                                                        TGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGC                                                                                                                                               >  1:2261818/1‑67                                                                                                                      TTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCGCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAG                                                                                              <  2:583969/102‑1                                                                                                                      TTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCGCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAG                                                                                              >  1:583969/1‑102                                                                                                                           CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGC                                                <  2:1238299/143‑1                                                                                                                           CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTC                                                                               <  1:2325811/112‑1                                                                                                                           CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTC                                                                               >  2:2325852/1‑112                                                                                                                           CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTC                                                                               >  2:2325811/1‑112                                                                                                                           CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTC                                                                               <  1:2325852/112‑1                                                                                                                           CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGC                                                                                            <  2:584079/99‑1                                                                                                                           CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGC                                                                                            <  1:815028/99‑1                                                                                                                           CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGC                                                                                            >  1:584079/1‑99                                                                                                                           CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGC                                                                                            >  2:815028/1‑99                                                                                                                           CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCATACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGC                                                >  1:1238299/1‑143                                                                                                                            CGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGC                                                                                                                                  >  2:621484/1‑60                                                                                                                            CGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGC                                                                                                                                  <  1:621484/60‑1                                                                                                                             GCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGA                                       >  2:1455974/1‑150                                                                                                                                       TGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACA                                                                                                                                      >  2:510927/1‑45                                                                                                                                       TGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACA                                                                                                                                      <  1:510927/45‑1                                                                                                                                            GCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCC                        <  1:1455974/150‑1                                                                                                                                                         ATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGG           <  2:350588/150‑1                                                                                                                                                          TTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGC          >  1:1352826/1‑150                                                                                                                                                          TTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGC          <  2:338290/150‑1                                                                                                                                                               GGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGGTGTCGACCCGGCCGACCGGCGGCCAGTA     >  1:1437320/1‑150                                                                                                                                                                 GTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCACCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACT   >  2:2025878/1‑150                                                                                                                                                                 GTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGG                                                    >  2:973848/1‑101                                                                                                                                                                 GTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGG                                                    <  1:973848/101‑1                                                                                                                                                                  TAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTT  <  2:2430109/150‑1                                                                                                                                                                  TAAACCCGCTCAACAACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTT  <  1:2332147/150‑1                                                                                                                                                                      CCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGG                                                                                             >  2:1048059/1‑55                                                                                                                                                                      CCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGG                                                                                             <  1:1048059/55‑1                                                                                                                                                                                                                                                                                                                         CAACGTGTTCGGCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1126767‑1126598 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcattcgcgggtaaacccgcTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTT  >  NC_002947/1126656‑1126796

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.