New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1170760 | 86 (0.920) | 6 (0.070) | 5/228 | NT | 6.9% | intergenic (‑345/+88) | leuA/PP_1026 | 2‑isopropylmalate synthase/M23/M37 family peptidase |
? | NC_002947 | = 1170822 | 83 (0.980) | intergenic (‑407/+26) | leuA/PP_1026 | 2‑isopropylmalate synthase/M23/M37 family peptidase |
GCAAGCGTTCGGGAAAAATTGAGAGGAATGCTTAAAAAAAGCCATTAGGCGAGATTTTATGGCTTGGATCTGCTAGGCGCTTATTGATGTTTGCGCAGTATTTTTCGATGGCGCAACACAGTTGAACTGCTGTCGACTGTGCTGGCCTCTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1170602‑1170760 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggcaCGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAGA < NC_002947/1170822‑1170749 GCAAGCGTTCGGGAAAAATTGAGAGGAATGCTTAAAAAAAGCCATTAGGCGAGATTTTATGGCTTGGATCTGCTAGGCGCTTATTGATGTTTGCGCAGTATTTTTCGATGGCGCAACACAGTTGAACTGCTGTCGACTGTGCTGGCCTCT > 1:1696327/1‑150 GCAAGCGTTCGGGAAAAATTGACAGGAATGCTCAAAAAAAGCCATTAGGAGCGAGTTTATGGCTTGGATCTGCTAGGCGCTTATTGATGTTTGCGCAGTATTTTTCGATGGCGCAACACAGTTGAACTGCTGTCGACTGTGCTGGCCTCT < 1:1969976/150‑1 AAGCGTTCGGGAAAAATTGAGAGGAATGCTTAAAAAAAGCCATTAGGCGAGATTTTATGGCTTGGATCTGCTAGGCGCTTATTGATGTTTGCGCAGTATTTTTCGATGGCGCAACACAGTTGAACTGCTGTCGACTGTGCTGGCCTCTTC > 2:1222272/1‑150 GCGTTCGGGAAAAATTGAGAGGAATGCTTAAAAAAAGCCATTAGGCGAGATTTTATGGCTTGGATCTGCTAGGCGCTTATTGATGTTTGCGCAGTATTTTTCGATGGCGCAACACAGTTGAACTGCTGTCGACTGTGCTGGCCTCTTCGC < 1:2328888/150‑1 AGGAATGCTTAAAAAAAGCCATTAGGCGAGATTTTATGGCTTGGATCTGCTAGGCGCTTATTGATGTTTGCGCAGTATTTTTCGATGGCGCAACACAGTTGAACTGCTGTCGACTGTGCTGGCCTCTTCGCG > 1:2421422/1‑132 AGGAATGCTTAAAAAAAGCCATTAGGCGAGATTTTATGGCTTGGATCTGCTAGGCGCTTATTGATGTTTGCGCAGTATTTTTCGATGGCGCAACACAGTTGAACTGCTGTCGACTGTGCTGGCCTCTTCGCG < 2:2421422/132‑1 CATTAGGCGAGATTTTATGGCTTGGATCTGCTAGGCGCTTATTGATGTTTGCGCAGTATTTTTCGATGGCGCAACACAGTTGAACTGCTGTCGACTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAG > 1:2369265/1‑150 ATCTGCTAGGCGCTTATTGATGTTTGCGCAGTATTTTTCGATGGCGCAACACAGTTGAACTGCTGTCGACTGTGCTGGCCTCTTCGCGG > 1:1073156/1‑89 ATCTGCTAGGCGCTTATTGATGTTTGCGCAGTATTTTTCGATGGCGCAACACAGTTGAACTGCTGTCGACTGTGCTGGCCTCTTCGCGG < 2:1073156/89‑1 TCTGCTAGGCGCTTATTGATGTTTGCGCAGTATTTTTCGATGGCGCAACACAGTTGAACTGCTGTCGACTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGG < 1:2154356/150‑1 TGCTAGGCGCTTATTGATGTTTGCGCAGTATTTTTCGATGGCGCAACACAGTTGAACTGCTGTCGACTGTGCTGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGC < 2:1489835/150‑1 TTGATGTTTGCGCAGTATTTTTCGATGGCGCAACACAGTTGAACTGCTGTCGACTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAGA < 2:2369265/150‑1 TGAACTGCTGTCGACTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGG > 1:867610/1‑96 TGAACTGCTGTCGACTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGG < 2:867610/96‑1 GCAAGCGTTCGGGAAAAATTGAGAGGAATGCTTAAAAAAAGCCATTAGGCGAGATTTTATGGCTTGGATCTGCTAGGCGCTTATTGATGTTTGCGCAGTATTTTTCGATGGCGCAACACAGTTGAACTGCTGTCGACTGTGCTGGCCTCTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1170602‑1170760 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggcaCGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAGA < NC_002947/1170822‑1170749 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |