| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1246670 = | 87 (0.930) | 4 (0.050) | 4/210 | NT | 5.2% | intergenic (+65/‑306) | PP_1087/argG | OmpA family outer membrane protein/argininosuccinate synthase |
| ? | NC_002947 | 1246736 = | 72 (0.920) | intergenic (+131/‑240) | PP_1087/argG | OmpA family outer membrane protein/argininosuccinate synthase | |||||
GCATGAGGACCTTGGAGGGGCGTCGAGCCGCAGCGTGCATGCCTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1246837‑1246670‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctcgatctcacaggcgcAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAAGGTCCTCATGCCACATCCCTCAACCTACCGCCCGTCGCCCCTACGAAAGTTCCTGTC > NC_002947/1246736‑1246883 gatctAGGACCTTGGAGGGGCGTCGAGCCGCAGCGTGCATGCCTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGCGCGCTTCAGGTGTCCGCCTCGAAACATTCTGC < 1:664079/145‑1GCATGAGGACCTTGGAGGGGCGTCGAGCCGCAGCGTGCATGCCTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGC > 2:266733/1‑150GCATGAGGACCTTGGAGGGGCGTCGAGCCGCAGCGTGCATGCCTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGC < 1:1490640/150‑1 ATGAGGACCTTGGAGGGGCGTCGAGCCGCAGCGTGCATGCCTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGC > 2:2282934/1‑150 ATGAGGACCTTGGAGGGGCGTCGAGCCGCAGCGTGCATGCCTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGC > 2:1070972/1‑150 AGGACCTTGGAGGGGCGTCGAGCCGCAGCGTGCATGCCTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCG > 1:2120075/1‑150 GGACCTTGGAGGGGCGTCGAGCCGCAGCGTGCATGCCTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGAACTTCTGTGTGTTTTATAGCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGagatc > 2:664079/1‑145 CTTGGAGGGGCGTCGAGCCGCAGCGTGCATGCCTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTC < 2:1957103/144‑1 CTTGGAGGGGCGTCGAGCCGCAGCGTGCATGCCTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTC > 1:1957103/1‑144 TTGGAGGGGCGTCGATCCGCAGCGTGCATGCCTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACTTTCTGCGCCTGTCAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCA < 2:1325321/150‑1 TTGGAGGGGCGTCGAGCCGCAGCGTGCATGCCTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCA > 1:1811665/1‑150 TGGAGGGGCGTCGAGCCGCAGCGTGCATGCCTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCAC < 1:319470/150‑1 GAGGGGCGTCGAGCCGCAGCGTGCATGCCTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAG > 1:1744643/1‑150 GAGGGGCGTCGAGCCGCAGCGTGCATGCCTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAG < 1:1070972/150‑1 GGGCGTCGAGCCGCAGCGTGCATGCCTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATAGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCG > 1:193033/1‑150 CTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATC > 2:145054/1‑116 CTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATC < 1:145054/116‑1 TTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGAT > 1:1931771/1‑114 TTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGAT < 2:1931771/114‑1 ACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGC > 2:879410/1‑63 ACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGC < 1:879410/63‑1 GATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCAT < 2:1715904/120‑1 GATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCAT > 1:1715904/1‑120 TCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAAGGTCC > 1:1348549/1‑150 GTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAAGGTCCTCATGCCACATCC < 2:1348549/150‑1 GCGCTCGATCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAAGGTCCTCATGCCACATCCCTCAACCTACCGCCCGTCGCC > 1:1273686/1‑150 GCTCGATCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCA < 2:1571505/85‑1 GCTCGATCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCA > 1:1571505/1‑85 GCTCGATCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCA < 2:1775088/58‑1 GCTCGATCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCA > 1:1775088/1‑58 CTCGATCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGCTCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAAGGTCCTCATGCCACATCCCTCAACCTACCGCCCGTCGCCCCT > 2:799494/1‑150 CTCGATCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAAGGTCCTCATGCCACATCCCTCAACCTACCGCCCGTCGCCCCT > 1:948067/1‑150 CTCGATCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGA > 2:1310963/1‑52 CTCGATCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGA < 1:1310963/52‑1 TCGATCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAAGGTCCTCATGCCACATCCCTCAACCTACCGCCCGTCGCCCCTA < 1:1394394/150‑1 GATCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAA < 2:1383528/105‑1 GATCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAA > 1:1383528/1‑105 ATCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAAGGTCCTCATGCCACATCCCTCAACCTACCGCCCGTCGCCCCTACGA > 2:2186499/1‑150 gCTCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAAGGTCCTCATGCCACATCCCCCAACCTACCCCCCGTCGCCCCTACGAA > 2:2378758/2‑150 TCACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAAGGTCCTCATGCCACATCCCTCAACCTACCGCCCGTCGCCCCTACGAAAG > 1:1524264/1‑150 ACAGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAAGGTCCTCATGCCACATCCCTCAACCTACCGCCCGTCGCCCCTACGAAAGTT < 2:2105745/150‑1 AGGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAAGGTCCTCATGCCACATCCCTCAACCTACCGCCCGTCGCCCCTACGAAAGTTCC < 2:1177944/150‑1 GGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAAGGTCCTCATGCCACATCCCTCAACCTACCGCCCGTCGCCCCTACGAAAGTTCCT < 2:1942503/150‑1 GGCGCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAAGGTCCTCATGCCACATCCCTCAACCTACCGCCCGTCGCCCCTACGAAAGTTCCT < 2:418815/150‑1 GCAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAAGGTCCTCATGCCACATCCCTCAACCTACCGCCCGTCGCCCCTACGAAAGTTCCTGTC < 2:1395865/150‑1 GCATGAGGACCTTGGAGGGGCGTCGAGCCGCAGCGTGCATGCCTTGAGGAGTTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCACCTCAAGACATTCTGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1246837‑1246670‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctcgatctcacaggcgcAGAATGTCTTGAGGTGGACACCTGGCGGCGCTCGATCTCACAGGCGCTGAACTCCTCAAGGCATGCACGCTGCGGCTCGACGCCCCTCCAAGGTCCTCATGCCACATCCCTCAACCTACCGCCCGTCGCCCCTACGAAAGTTCCTGTC > NC_002947/1246736‑1246883 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |