New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1264558 | 84 (0.900) | 6 (0.070) | 6/238 | NT | 6.7% | coding (868/1017 nt) | PP_1106 | hypothetical protein |
? | NC_002947 | = 1264577 | 88 (0.990) | coding (849/1017 nt) | PP_1106 | hypothetical protein |
CTTTCATGGCGAGGGGGCGGTGTTGGGCACATCGTCTTCGTCGCCATACTCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1264406‑1264558 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccTGGCCTGCTCTGGGCCATTGGCCAGACCGGTGCCCAACGGGTGATGGTCACTCACGGCTCGGTCGAGGTACTGGTGCGCTACCTCACCGAACAAGGCCTGGATGCCCGCGCCTTCGTCACCGAGTATGGCGACGAAGACGATGTGCCC < NC_002947/1264577‑1264430 CTTTCATGGCGAGGGGGCGGTGTTGGGCACATCGTCTTCGTCGCCATACTCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTG > 1:1711182/1‑150 TTTCATGGCGAGGGGGCGGTGTTGGGCACATCGTCTTCGTCGCCATACTCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGG > 1:2296288/1‑150 TTTCATGGCGAGGGGGCGGTGTTGGGCACATCGTCTTCGTCGCCATACTCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGG > 2:1153139/1‑150 TTCATGGCGAGGGGGCGGTGTTGGGCACATCGTCTTCGTCGCCATACTCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGCCCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGC < 2:2234357/150‑1 TGGGCACATCGTCTTCGTCGCCATACTCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCTGGCCTGCTCTGGGCCATTG < 1:1153139/150‑1 CACATCGTCTTCGTCGCCATACTCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCTGGCCTGCTCTGGGCCATTGGCCA < 2:2296288/150‑1 TCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCTGGCCTGCTCTGGGCCATTGGCCAGACCGGTG > 2:852148/1‑136 TCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCTGGCCTGCTCTGGGCCATTGGCCAGACCGGTG < 1:852148/136‑1 CTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGC < 1:619484/75‑1 CTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGC > 2:619484/1‑75 CCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCTGGCCTGCTCTGGGCCATTGGCC < 1:538991/72‑1 CCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCTGGCCTGCTCTGGGCCATTGGCC > 2:538991/1‑72 TGGCCTGGCCTGCTCTGGGCCATTGGCCAGACCGGTGCCCAACGGGTGATGGTCACTCACGGCTCGGTCGAGGTACTGGTGCGCTACCTCACCGAACAAGGCCTGGATGCCCGCGCCTTCGTCACCGAGTATGGCGACGAAGACGATGTG > 1:212334/1‑150 GGCCTGGCCTGCTCTGGGCCATTGGCCAGACCGGTGCCCAACGGGTGATGGTCACTCACGGCTCGGTCGAGGTACTGGTGCGCTACCTCACCGAACAAGGCCTGGATGCCCGCGCCTTCGTCACCGAGTATGGCGACGAAGACGATGTGC < 2:1895239/150‑1 GCCTGGCCTGCTCTGGGCCATTGGCCAGACCGGTGCCCAACGGGTGATGGTCACTCACGGCTCGGTCGAGGTACTGGTGCGCTACCTCACCGAACAAGGCCTGGATGCCCGCGCCTTC < 1:830260/118‑1 GCCTGGCCTGCTCTGGGCCATTGGCCAGACCGGTGCCCAACGGGTGATGGTCACTCACGGCTCGGTCGAGGTACTGGTGCGCTACCTCACCGAACAAGGCCTGGATGCCCGCGCCTTC > 2:830260/1‑118 CCTGGCCTGCTCTGGGCCATTGGCCAGACCGGTGCCCAACGGGTGATGGTCACTCACGGCTCGGTCGAGGTACTGGTGCGCTACCTCACCGAACAAGGCCTGGATGCCCGCGCCTTCGTCACCGAGTATGGCGACGAAGACGATGTGCCC > 1:847352/1‑150 CTTTCATGGCGAGGGGGCGGTGTTGGGCACATCGTCTTCGTCGCCATACTCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1264406‑1264558 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccTGGCCTGCTCTGGGCCATTGGCCAGACCGGTGCCCAACGGGTGATGGTCACTCACGGCTCGGTCGAGGTACTGGTGCGCTACCTCACCGAACAAGGCCTGGATGCCCGCGCCTTCGTCACCGAGTATGGCGACGAAGACGATGTGCCC < NC_002947/1264577‑1264430 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |