New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 1331999NA (NA)8 (0.090) 5/242 NT 6.8% coding (1218/1644 nt) PP_1157 acetolactate synthase
?NC_002947 = 1332043 114 (1.220)coding (1262/1644 nt) PP_1157 acetolactate synthase

CACAGCGCATGGTGGCTGACATCCGTCGTGTACTGCCGTCCGAAGGCATCGTCGCCCTGGACAACGGCATCTACAAGATCTGGTTCGCCCGCAACTACAAAGCGCACAAGCCAAACACCGTGCTGCTGGACAACGCCCTGGCGacca‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1331857‑1331999
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCAGGTGCGCGGCCATTGCCGATGGCAGGCCGGCGCCCATGGTCGCCAGGGCGTTGTCCAGCAGCACGGTGTTTGGCTTGTGCGCTTTGTAGTTGCGGGCGAACCAGATCTTGTAGATGCCGTTGTCCAGGGCGACGATGCCTTCGGACGGC  <  NC_002947/1332043‑1331891
                                                                                                                                                                                                                                                                                                          
CACAGCGCATGGTGGCTGACATCCGTCGTGTACTGCCGTCCGAAGGCATCGTCGCCCTGGACAACGGCATCTACAAGATCTGGTTCGCCCGCAACTACAAAGCGCACAAGCCAAACACCGTGCTGCTGGACAACGCCCTGGCGACCAGGT                                                                                                                                                     >  1:2091447/1‑150
                                 TGCCGTCCGAAGGCATCGTCGCCCTGGACAACGGCATCTACAAGATCTGGTTCGCCCGCAACTACAAAGCGCACAAGCCAAACACCGTGCTGCTGGACAACGCCCTGGCGACCAGGTGCGCGGCCATTGCCGATGGCAGGCCGGCGCCCA                                                                                                                   >  2:1422258/1‑150
                                  GCCGTCCGAAGGCATCGTCGCCCTGGACAACGGCATCTACAAGATCTGGTTCGCCCGCAACTACAAAGCGCACAAGCCAAACACCGTGCTGCTGGACAACGCCCTGGCGACCAGGTGCGCGGCCATTGCCGATGGCAGGCCGGCGCCCAT                                                                                                                  <  1:1422258/150‑1
                                  GCCGTCCGAAGGCATCGTCGCCCTGGACAACGGCATCTACAAGATCTGGTTCGCCCGCAACTACAAAGCGCACAAGCCAAACACCGTGCTGCTGGACAACGCCCTGGCGACCAGGTGAGCGGCCATTGCCGATGGCAGGCCGGCGCCCAT                                                                                                                  <  2:142562/150‑1
                                   CCGTCCGAAGGCATCGTCGACCTAGGAACGCTTCACTACAAGAGCTGGTTCGCGCGCAACTACAAAGCGCACAAGCCAAACACCGTGCTGCTGGACAACGCCCTGGCGACCAGGTGCGCGGCCATTGCCGATGGCAGGCCGGCGCCCATG                                                                                                                 <  2:2091447/150‑1
                                                        CTGGACAACGGCATCTACAAGATCTGGTTCGCCCGCAACTACAAAGCGCACAAGCCAAACACCGTGCTGCTGGACAACGCCCTGGCGACCAGGTGCGCGGCCATTGCCGATGGCAGGCCGGCGCCCAT                                                                                                                  <  1:1043688/128‑1
                                                        CTGGACAACGGCATCTACAAGATCTGGTTCGCCCGCAACTACAAAGCGCACAAGCCAAACACCGTGCTGCTGGACAACGCCCTGGCGACCAGGTGCGCGGCCATTGCCGATGGCAGGCCGGCGCCCAT                                                                                                                  >  2:1043688/1‑128
                                                                                        CCCGCAACTACAAAGCGCACAAGCCAAACACCGTGCTGCTGGACAACGCCCTGGCGACCATGGGCGCCGGCCATTGCCGATGGCAGGCCGGCGCCCAT                                                                                                                  >  1:1087217/1‑98
                                                                                        CCCGCAACTACAAAGCGCACAAGCCAAACACCGTGCTGCTGGACAACGCCCTGGCGACCATGGGCGCCGGCCATTGCCGATGGCAGGCCGGCGCCCAT                                                                                                                  <  2:1087217/98‑1
                                                                                                                                                 CCAGGTGCGCGGCCATTGCCGATGGCAGGCCGGCGCCCATGGTCGCCAGGGCGTTGTCCAGCAGCACGGTGTTTGGCTTGTGCGCTTTGTAGTTGCGGGCGAACCAGATCTTGTAGATGCCGTTGTCCAGGGCGACGATGCCTTCGGACG    >  2:1638769/1‑150
                                                                                                                                                  CAGGTGCGCGGCCATTGTATATGGCAGGCCGGCGCCCATGGTCGCCAGGGCGTTGTCCAGCAGCACGGTGTTTGGCTTGTGCGCTTTGTAGTTGCGGGCGAACCAGATCTTGTAGATGCCGTTGTCCAGGGCGACGATGCCTTCGGACGG   >  1:2019138/1‑150
                                                                                                                                                  CAGGTGCGCGGCCATTGCCGATGGCAGGCCGGCGCCCATGGTCGCCAGGGCGTTGTCCAGCAGCACGGTGTTTGGCTTGTGCGCTTTGTAGTTGCGGGCGAACCAGATCTTGTAGATGCCGTTGTCCAGGGCGACGATGCCTTCGGACGG   >  1:610790/1‑150
                                                                                                                                                  CAGGTGCGCGGCCATTGCCGATGGCAGGCCGGCGCCCATGGTCGCCAGGGCGTTGTCCAGCAGCACGGTGTTTGGCTTGTGCGCTTTGTAGTTGCGGGCGAACCAGATCTTGTAGATGCCGTTGTCCAGGGCGACGATGCCTTCGGACGG   <  2:406670/150‑1
                                                                                                                                                   AGGTGCGCGGCCATTGCCGATGGCAGGCCGGCGCCCATGGTCGCCAGGGCGTTGTCCAGCAGCACGGTGTTTGGCTTGTGCGCTTTGTAGTTGCGGGCGAACCAGATCTTGTAGATGCCGTTGTCCAGGGCGACGATGCCTTCGGACGGC  <  1:1508484/150‑1
                                                                                                                                                                                                                                                                                                          
CACAGCGCATGGTGGCTGACATCCGTCGTGTACTGCCGTCCGAAGGCATCGTCGCCCTGGACAACGGCATCTACAAGATCTGGTTCGCCCGCAACTACAAAGCGCACAAGCCAAACACCGTGCTGCTGGACAACGCCCTGGCGacca‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1331857‑1331999
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCAGGTGCGCGGCCATTGCCGATGGCAGGCCGGCGCCCATGGTCGCCAGGGCGTTGTCCAGCAGCACGGTGTTTGGCTTGTGCGCTTTGTAGTTGCGGGCGAACCAGATCTTGTAGATGCCGTTGTCCAGGGCGACGATGCCTTCGGACGGC  <  NC_002947/1332043‑1331891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.