New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1380537 =81 (0.870)4 (0.040)
+AAG
4/244 NT 5.5% intergenic (‑257/+5) PP_1202/PP_t67 phospholipids modification protein/tRNA‑Met
?NC_002947 1380715 = 61 (0.650)intergenic (‑97/+38) PP_t67/PP_t66 tRNA‑Met/tRNA‑Met

GCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCTCCCGCAACCATATTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1380607‑1380537
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAGGCCACTGTGTTAACAGTGGCCTT  >  NC_002947/1380715‑1380742
                                                                       |||                            
GCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCTCCCGCAACCAGATTCAAGAAAAGGCCACTGTGTTAACAGTGGCCT   <  1:617657/101‑1
GCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCTCCCGCAACCAGATTCAAGAAAAGGCCACTGTGTTAACAGTGGCCT   >  2:617657/1‑101
                            CCCGAAGGTCGTCGGTTCAAATCCGGCTCCCGCAACCAGATTCAAGAAAAGGCCACTGTGTTAACAGTGGCCTT  >  1:36125/1‑74
                            CCCGAAGGTCGTCGGTTCAAATCCGGCTCCCGCAACCAGATTCAAGAAAAGGCCACTGTGTTAACAGTGGCCTT  <  2:36125/74‑1
                                                                       |||                            
GCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCTCCCGCAACCATATTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1380607‑1380537
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAGGCCACTGTGTTAACAGTGGCCTT  >  NC_002947/1380715‑1380742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.