| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1443111 = | 55 (0.590) | 10 (0.130) | 9/200 | NT | 23.8% | intergenic (‑42/+134) | ghrB/PP_1262 | 2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator |
| ? | NC_002947 | 1443179 = | 20 (0.270) | intergenic (‑110/+66) | ghrB/PP_1262 | 2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator | |||||
GCAGACCTGAAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1443283‑1443111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggcttgcccgcgaaggTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCG > NC_002947/1443179‑1443319 GCAGACCTGAAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGT > 2:307131/1‑150 aaACCAGAATACCCATCATTGGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAG < 1:1853760/148‑1 AGACCTGAAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAG < 1:1022230/150‑1 CCTGAAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAG < 2:2338897/150‑1 GAAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGG > 2:2050153/1‑150 GAAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTAATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGG < 1:307131/150‑1 GAAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCGGCTGCAATGCGGGGGCGGACAATGGTAGGCCGCCAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGG < 1:412451/150‑1 AAAACCCATCAGGTGCTGATCGCCACCTATACGGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGG < 2:2133468/150‑1 AAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGG < 2:2298080/150‑1 ACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTT < 2:722038/150‑1 CCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGC > 2:321547/1‑150 ATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGG < 2:250685/142‑1 ATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGG > 1:250685/1‑142 TCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCG < 1:103074/150‑1 GTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCGCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAA < 2:2165898/150‑1 ATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTT < 1:1540991/135‑1 ATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTT > 2:1540991/1‑135 CCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCG < 2:1232965/136‑1 CCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCG > 1:1232965/1‑136 GCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGGAGGGGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTTGCGGTCAGCCCCcg > 2:110747/1‑148 AGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGG < 1:1838514/147‑1 AGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGG > 2:1838514/1‑147 CCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTT > 2:772483/1‑150 CCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGCCCGCCCCCGCATTGCAGCAGCTTTTT > 2:1623622/1‑122 CCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGCCCGCCCCCGCATTGCAGCAGCTTTTT < 1:1623622/122‑1 CCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTC > 2:923968/1‑150 CGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGC < 2:701996/81‑1 CGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGC > 1:701996/1‑81 GCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAG > 2:2178400/1‑150 GCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAG < 2:1643700/50‑1 GCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAG > 1:1643700/1‑50 GTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCT < 2:2159059/150‑1 GAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGG < 1:923968/150‑1 GAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATG > 1:1754771/1‑111 GAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATG < 2:1754771/111‑1 GCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCA < 2:1935308/150‑1 GCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAG < 1:2429198/118‑1 GCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAG > 2:2429198/1‑118 GCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATC > 1:852102/1‑98 GCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATC < 2:852102/98‑1 CTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAG > 1:2164870/1‑150 TTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGAT < 2:1284344/91‑1 TTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGAT > 1:1284344/1‑91 CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGC > 2:2175619/1‑150 CCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGTCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCG > 2:786693/1‑150 GCAGACCTGAAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1443283‑1443111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggcttgcccgcgaaggTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCG > NC_002947/1443179‑1443319 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |