New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1491916	89 (0.950)	8 (0.090)	7/230	NT	8.6%	coding (1572/1902 nt)	cysNC	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase
	?	NC_002947	= 1491933	89 (1.040)					coding (1589/1902 nt)	cysNC	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase

TCGGGTGCTGGCAAGAGCACTTTGGCCTATGCCGTTGAGCGCAAGCTGTTCGACATGGGCCGTGCGGTGTACGTGCTCGATGGCCAGAACCTGCGTCACGACCTGAACAAGGGCCTGCCACAGGACCGCGCTGGCCGTACCGAGAACTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1491764‑1491916 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaactggcgcGCCACATGGGCGGCGCGGCGCCAGTTCTCGGTACGGCCAGCGCGGTCCTGTGGCAGGCCCTTGTTCAGGTCGTGACGCAGGTTCTGGCCATCGAGCACGTACACCGCACGGCCCATGTCGAACAGCTTGCGCTCAACGGCATAGGCCA  <  NC_002947/1491933‑1491786                                                                                                                                                                                                                                                                                                               TCGGGTGCTGGCAAGAGCACTTTGGCCTATGCCGTTGAGCGCAAGCTGTTCGACATGGGCCGTGCGGTGTACGTGCTCGATGGCCAGAACCTGCGTCACGACCTGAACAAGGGCCTGCCACAGGACCGCGCTGGCCGTACCGAGAACTGG                                                                                                                                                         <  1:1138565/150‑1  CGGGTGCTGGCAAGAGCACTTTGGCCTATGCCGTTGAGCGCAAGCTGTTCGACATGGGCCGTGCGGTGTACGTGCTCGATGGCCAGAACCTGCGTCACGACCTGAACAAGGGCCTGCCACAGGACCGCGCTGGCCGTACCGAGAACTGGC                                                                                                                                                        <  1:672090/150‑1   GGGTGCTGGCAAGAGCACTTTGGCCTATGCCGTTGAGCGCAAGCTGTTCGACATGGGCCGTGCGGTGTACGTGCTCGATGGCCAGAACCTGCCACCTGACCGGGACAGGGGCCTGCCACAGGACCGCGCTGGCCGTACCGAGAACTGGCG                                                                                                                                                       >  2:665451/1‑150                           CTATGCCGTTGAGCGCAAGCTGTTCGACATGGGCCGTGCGGTGTACGTGCTCGATGGCCAGAACCTGCGTCACGACCTGAACAAGGGCCTGCCACAGGACCGCGCTGGCCGTACCGAGAACTGGCGCGCCACATGGGCGGCGCGGCGCCA                                                                                                                               <  1:1109616/150‑1                             ATGCCGTTGAGCGCAAGCTGTTCGACATGGGCCGTGCGGTGTACGTGCTCGATGGCCAGAACCTGCGTCACGACCTGAACAAGGGCCTGCCACAGGACCGCGCTGGCCGTACCGAGAACTGGCGCGCCACATGGGCGGCGCGGCGCCAGT                                                                                                                             <  2:1171816/150‑1                                     GAGCGCAAGCTGTTCGACATGGGCCGTGCGGTGTACGTGCTCGATGGCCAGAACCTGCGTCACGACCTGAACAAGGGCCTGCCACAGGACCGCGCTGGCCGTACCGAGAA                                                                                                                                                             >  2:1977713/1‑110                                     GAGCGCAAGCTGTTCGACATGGGCCGTGCGGTGTACGTGCTCGATGGCCAGAACCTGCGTCACGACCTGAACAAGGGCCTGCCACAGGACCGCGCTGGCCGTACCGAGAA                                                                                                                                                             <  1:1977713/110‑1                                         GCAAGCTGTTCGACATGGGCCGTGCGGTGTACGTGCTCGATGGCCAGAACCTGCGTCACGACCTGAACAAGGGCCTGCCACAGGACCGCGCTGGCCGTACCGAGAACTGGCG                                                                                                                                                       <  1:870451/112‑1                                         GCAAGCTGTTCGACATGGGCCGTGCGGTGTACGTGCTCGATGGCCAGAACCTGCGTCACGACCTGAACAAGGGCCTGCCACAGGACCGCGCTGGCCGTACCGAGAACTGGCG                                                                                                                                                       >  2:870451/1‑112                                                 TTCGACATGGGCCGTGCGGTGTACGTGCTCGATGGCCAGAACCTGCGTCACGACCTGAACAAGGGCCTGCCACAGGACCGCGCTGGCCGTACCGAGAACTGGCGCGCCACATGGGCGGCGCGGCGCCAGTTC                                                                                                                           <  2:1697423/132‑1                                                 TTCGACATGGGCCGTGCGGTGTACGTGCTCGATGGCCAGAACCTGCGTCACGACCTGAACAAGGGCCTGCCACAGGACCGCGCTGGCCGTACCGAGAACTGGCGCGCCACATGGGCGGCGCGGCGCCAGTTC                                                                                                                           >  1:1697423/1‑132                                                                           GCTCGATGGCCAGAACCTGCGTCACGACCTGAACAAGGGCCTGCCACAGGACCGCGCTGGCCGTACCGAGAACTGGCGCGCCACATGGGCGGCGCGGCGCCA                                                                                                                               <  2:144145/102‑1                                                                           GCTCGATGGCCAGAACCTGCGTCACGACCTGAACAAGGGCCTGCCACAGGACCGCGCTGGCCGTACCGAGAACTGGCGCGCCACATGGGCGGCGCGGCGCCA                                                                                                                               >  1:144145/1‑102                                                                                     CAGAACCTGCGTCACGACCTGAACAAGGGCCTGCCACAGGACCGCGCTGGCCGTACCGAGAACTGGCGCGCCACATGGGCGGCGCGGCGCCAGTTCTCGG                                                                                                                       >  1:2038136/1‑100                                                                                     CAGAACCTGCGTCACGACCTGAACAAGGGCCTGCCACAGGACCGCGCTGGCCGTACCGAGAACTGGCGCGCCACATGGGCGGCGCGGCGCCAGTTCTCGG                                                                                                                       <  2:2038136/100‑1                                                                                                                                                   CTGGCGCGCCACATGGGCGGCGCGGCGCCAGTTCTCGGTACGGCCAGCGCGGTCCTGTGGCAGGCCCTTGTTCAGGTCGTGACGCAGGTTCTGGCCATCGAGCACGTACACCGCACGGCCCATGTCGAACAGCTTGCGCTCAACGGAATA       <  2:751574/150‑1                                                                                                                                                    TGGCGCGCCACATGGGCGGCGCGGCGCCAGTTCTCGGTACGGCCAGCGCGGTCCTGTGGCAGGCCCTTGTTCAGGTCGTGACGCAGGTTCTGGCCATC                                                          <  1:2264603/98‑1                                                                                                                                                    TGGCGCGCCACATGGGCGGCGCGGCGCCAGTTCTCGGTACGGCCAGCGCGGTCCTGTGGCAGGCCCTTGTTCAGGTCGTGACGCAGGTTCTGGCCATC                                                          >  2:2264603/1‑98                                                                                                                                                     GGCGCGCCACATGGGCGGCGCGGCGCCAGTTCTCGGTACGGCCAGCGCGGTCCTGTGGCAGGCCCTTGTTCAGGTCGTGACGCAGGTTCTGGCCATCGAGCACGTACACCGCACGGCCCATGTCGAACAGCTTGCGCTCAACGGCATA       <  2:1103137/148‑1                                                                                                                                                     GGCGCGCCACATGGGCGGCGCGGCGCCAGTTCTCGGTACGGCCAGCGCGGTCCTGTGGCAGGCCCTTGTTCAGGTCGTGACGCAGGTTCTGGCCATCGAGCACGTACACCGCACGGCCCATGTCGAACAGCTTGCGCTCAACGGCATA       >  1:1103137/1‑148                                                                                                                                                        GCGCCACATGGGCGGCGCGGCGCCAGTTCTCGGTACGGCCAGCGCGGTCCTGTGGCAGGCCCTTGTTCAGGTCGTGACGCAGGTTCTGGCCATCGAGCACGTACACCGCACGGCCCATGTCGAACAGCTTGCGCTCAACGGCATAGGCCA  <  1:1056015/150‑1                                                                                                                                                                                                                                                                                                               TCGGGTGCTGGCAAGAGCACTTTGGCCTATGCCGTTGAGCGCAAGCTGTTCGACATGGGCCGTGCGGTGTACGTGCTCGATGGCCAGAACCTGCGTCACGACCTGAACAAGGGCCTGCCACAGGACCGCGCTGGCCGTACCGAGAACTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1491764‑1491916 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaactggcgcGCCACATGGGCGGCGCGGCGCCAGTTCTCGGTACGGCCAGCGCGGTCCTGTGGCAGGCCCTTGTTCAGGTCGTGACGCAGGTTCTGGCCATCGAGCACGTACACCGCACGGCCCATGTCGAACAGCTTGCGCTCAACGGCATAGGCCA  <  NC_002947/1491933‑1491786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.