| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1511127 | 100 (1.070) | 6 (0.070) | 5/236 | NT | 5.9% | pseudogene (482/1851 nt) | PP_1325 | putative lipoprotein |
| ? | NC_002947 | = 1511141 | 98 (1.110) | pseudogene (468/1851 nt) | PP_1325 | putative lipoprotein | |||||
CCAGGGTGCCGGCGCTTTTCACGGCGAAGGCCAGGCTGGTCCAGCCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1510972‑1511127‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagcgCATCCTGCTGGCCCCGCTGCTTGGCGGCCAGGCCGCCAGCACCAACAATGACGCCATCTGGGCCTTGGTCGCCTCGCTGCCTGCAGAGCAACTGCAGCAGCCAACCAACGATCAGACCCTGGCTGGCTGGACCAGCCTGGCCTTCGCCG < NC_002947/1511141‑1510993 CCAGGGTGCCGGCGCTTTTCACGGCGAAGGCCAGGCTGGTCCAGCCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAA > 1:1755615/1‑150CCAGGGTGCCGGCGCTTTTCACGGCGAAGGCCAGGCTGGTCCAGCCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAA < 2:2432457/150‑1 CAGGGTGCCGGCGCTTTTCACGGCGAAGGCCAGGCTGGTCCAGCCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGTGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAG < 2:1259375/150‑1 CAGGGTGCCGGCGCTTTTCACGGCGAAGGCCAGGCTGGTCCAGCCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAG > 1:1049470/1‑150 cGCCGGCGCTTTTCACGGCGAAGGCCAGGCTGGTCCAGCCTGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCG < 2:1487035/149‑1 TGCCGGCGCTTTTCACGGCGAAGGCCAGGCTGGTCCAGCCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCG < 2:862992/150‑1 TTTTCACGGCGAAGGCCAGGCTGGTCCAGCCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGCATCCTGCT > 2:2278536/1‑150 CCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGCATCCTGCTGGCCCCGCTGCTT > 1:1289815/1‑134 CCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGCATCCTGCTGGCCCCGCTGCTT < 2:1289815/134‑1 GCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGCATCCTGCTGGCCCCGCTGCTT < 1:2373199/85‑1 GCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGCATCCTGCTGGCCCCGCTGCTT > 2:2373199/1‑85 GGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTTGGCGGCCAGGCCGCCAGCACCAACAATGACGCCATCTGGGCCTTGGTCGCCTCGCTGCCTGCAGAGCAACTGCAGCAGCCAACCAACGATCAGACCCTGGCTGGCTGG > 1:2278536/1‑150 GCAGCGCATCCTGCTGGCCCCGCTGCTTGGCGGCCAGGCCGCCAGCACCAACAATGACGCCATCTGGGCCTTGGTCGCCTCGCTGCCTGCAGAGCAACTGCAGCAGCCAACCAACGATCAGACCCTGGCTGGCTGGACCAGCCTGGCCTT < 1:216303/150‑1 GCAGCGCATCCTGCTGGCCCCGCTGCTTGGCGGCCAGGCCGCCAGCACCAACAATGACGCCATCTGGGCCTTGGTCGCCTCGCTGCCTGCAGAGCAACTGCAGCAGCCAACCAACGATCAGACCCTGGCTGGCTGGACCAGCCTGGCCTT < 1:216304/150‑1 GCATCCTGCTGGCCCCGCTGCTGGGCGGCCAGGCCGCCAGCACCAACAATGACGCCATCTGGGCCTTGGTCGCCTCGCTGCCTGCAGCGCACATGTCACATCCAACCAACGATCAGACCCTGGCTGGCTGGACCAGCCTGGCCTTCGCCG < 2:1797081/150‑1 CCAGGGTGCCGGCGCTTTTCACGGCGAAGGCCAGGCTGGTCCAGCCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1510972‑1511127‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagcgCATCCTGCTGGCCCCGCTGCTTGGCGGCCAGGCCGCCAGCACCAACAATGACGCCATCTGGGCCTTGGTCGCCTCGCTGCCTGCAGAGCAACTGCAGCAGCCAACCAACGATCAGACCCTGGCTGGCTGGACCAGCCTGGCCTTCGCCG < NC_002947/1511141‑1510993 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |