| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1787081 = | 73 (0.780) | 4 (0.050) | 4/238 | NT | 6.2% | intergenic (+6/‑176) | tsf/pyrH | elongation factor Ts/uridylate kinase |
| ? | NC_002947 | 1787143 = | 51 (0.570) | intergenic (+68/‑114) | tsf/pyrH | elongation factor Ts/uridylate kinase | |||||
TTTTAGAAAATTCGTGCGGGCTGTTTGCAGCCTGCTAACTGTAGCGTGGCACCGCTTCGGTGCCAGCGAAGAGGGAGTCGTATAAACTCCTCCCCGTTTTGACAAAGAGGCTGCGCGCGTGAGCGGGCAGCCTCTTTGGGGCGACAGACGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1787233‑1787081‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggggAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCCGCACGAATTTTCTAAAAGTACGCCGCAGGAGAGACTCGCAATGGCTCAGCAGGTGAGTGGTCGCCAACCTCGC > NC_002947/1787143‑1787289 tttgaaAAAATTCGTGCGGGCTGTTTGCCGCCTGCTAACTGTAGCGTGGCACCGCTTCGGTGCCAGCGAAGAGGGAGTCATATAAACTCCTCCCCGTTTTGACAAAGTGGCTGCGCGCGTGAGCGGGCAGCCTCTTTGGGGCGACAGACG < 2:1593083/144‑1TTTTAGAAAATTCGTGCGGGCTGTTTGCAGCCTGCTAACTGTAGCGTGGCACCGCTTCGGTGCCAGCGAAGAGGGAGTCGTATAAACTCCTCCCCGTTTTGACAAAGAGGCTGCGCGCGTGAGCGGGCAGCCTCTTTGGGGCGACAGACG > 1:2250084/1‑150TTTTAGAAAATTCGTGCGGGCTGTTTGCAGCCTGCTAACTGTAGCGTGGCACCGCTTCGGTGCCAGCGAAGAGGGAGTCGTATAAACTCCTCCCCGTTTTGACAAAGAGGCTGCGCGCGTGAGCGGGCAGCCTCTTTGGGGCGACAGACG > 2:1800488/1‑150 TCGTATAAACTCCTCCCCGTTTTGACAAAGAGGCTGCGCGCGTGAGCGGGCAGCCTCTTTGGGGCGACAGACGGGGAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCC > 2:1807399/1‑150 TCCCCGTTTTGACAAAGAGGCTGCGCGCGTGAGCGGGCAGCCTCTTTGGGGCGACAGACGGGGAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCCGCACGAATTTTCT > 1:655767/1‑150 CGTTTTGACAAAGAGGCTGCGCGCGTGAGCGGGCAGCCTCTTTGGGGCGACAGACGGGGAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCCGCACGAATTTTCTAAAA < 2:655767/150‑1 GGCAGCCTCTTTGGGGCGACAGACGGGGAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCCGCACGAATTTTCTAAAAGTACGCCGCAGGAGAGACTCGCAATGGCTCA < 1:1807399/150‑1 GGGAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCCGCACGAATTTTCTAAAAGTACGCCGCAGGAGAGACTCGCAATGGCTCAGCAGGTGAGTGGTCGCCAACCTCGC < 2:1226517/150‑1 GGGAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCCGCACGAATTTTCTAAAAGTACGCCGCAGGAGAGACTCGCAATGGCTCAGCAGGTGAGTGGTCGCCAACCTCGC < 2:1990722/150‑1 GGGAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCCGCACGAATTTTCTAAAAGTACGCCGCAGGAGAGACTCGCAATGGCTCAGCAGGTGAGTGGTCGCCAACCTCGC < 2:613240/150‑1 TTTTAGAAAATTCGTGCGGGCTGTTTGCAGCCTGCTAACTGTAGCGTGGCACCGCTTCGGTGCCAGCGAAGAGGGAGTCGTATAAACTCCTCCCCGTTTTGACAAAGAGGCTGCGCGCGTGAGCGGGCAGCCTCTTTGGGGCGACAGACGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1787233‑1787081‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggggAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCCGCACGAATTTTCTAAAAGTACGCCGCAGGAGAGACTCGCAATGGCTCAGCAGGTGAGTGGTCGCCAACCTCGC > NC_002947/1787143‑1787289 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |