| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1923957 = | 107 (1.150) | 6 (0.070) | 6/240 | NT | 5.6% | coding (125/795 nt) | PP_1723 | 2‑aminoethylphosphonate ABC transporter permease |
| ? | NC_002947 | 1923984 = | 99 (1.110) | coding (98/795 nt) | PP_1723 | 2‑aminoethylphosphonate ABC transporter permease | |||||
ACATCAATGGCTGCTGAAAAGGAGCTACCATGCGCGCTGACATCCGTTCCGGCGGCTGGTACCACCGCCTCGTGGTCTACCTGCTGTTCCTGATCCTGCTGCTGCCCCTGGCCGGCACCCTCCTCTACTCGCTGGCCACCAGCTGGTCGGCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1924110‑1923957‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgagTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGT > NC_002947/1923984‑1924084 ACATCAATGGCTGCTGAAAAGGAGCTACCATGCGCGCTGACATCCGTTCCGGCGGCTGGTACCACCGCCTCGTGGTCTACCTGCTGTTCCTGATCCTGCTGCTGCCCCTGGCCGGCACCCTCCTCTACTCGCTGGCCACCAGCTGGTCGG > 1:2196275/1‑150 CATCAATGGCTGCTGAAAAGGAGCTACCATGCGCGCTGACATCCGTTCCGGCGGCTGGTACCACCGCCTCGTGGTCTACCTGCTGTTCCTGATCCTGCTGCTGCCCCTGGCCGGCACCCTCCTCTACTCGCTGGCCACCAGCTGGTCGGC < 2:803589/150‑1 TCAATGGCTGCTGAAAAGGAGCTACCATGCGCGCTGACATCCGTTCCGGCGGCTGGTACCACCGCCTCGTGGTCTACCTGCTGTTCCTGATCCTGCTGCTGCCCCTGGCCGGCACCCTCCTCTACTCGCTGGCCACCAGCTGGTCGGCGA > 1:1600270/1‑150 CAATGGCTGCTGAAAAGGAGCTACCATGCGCGCTGACATCCGTTCCGGCGGCTGGTACCACCGCCTCGTGGTCTACCTGCTGTTCCTGATCCTGCTGCTGCCCCTGGCCGGCACCCTCCTCTACTCGCTGGCCACCAGCTGGTCGGCGAG < 2:1065240/150‑1 TTCCGGCGGCTGGTACCACCGCCTCGTGGTCTACCTGCTGTTCCTGATCCTGCTGCTGCCCCTGGCCGGCACCCTCCTCTACTCGCTGGCCACCGGCTGGTCGGCGA > 1:1871129/1‑107 TTCCGGCGGCTGGTACCACCGCCTCGTGGTCTACCTGCTGTTCCTGATCCTGCTGCTGCCCCTGGCCGGCACCCTCCTCTACTCGCTGGCCACCGGCTGGTCGGCGA < 2:1871129/107‑1 CCACCGCCTCGTGGTCTACCTGCTGTTCCTGATCCTGCTGCTGCCCCTGGCCGGCACCCTCCTCTACTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGA < 1:1163814/100‑1 CCACCGCCTCGTGGTCTACCTGCTGTTCCTGATCCTGCTGCTGCCCCTGGCCGGCACCCTCCTCTACTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGA > 2:1163814/1‑100 TACCTGCTGTTCCTGATCCTGCTGCTGCCCCTGGCCGGCACCCTCCTCTACTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGG < 1:871934/86‑1 CCTCCTCTACTCGCTGGCCACCAGCTGGTCGGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTA < 2:871934/86‑1 CTCTACTCGCTGGCCACCAGCTGGTCGGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGC < 1:176814/126‑1 CTCTACTCGCTGGCCACCAGCTGGTCGGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGC > 2:176814/1‑126 GAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGT > 1:1891522/1‑104 GAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGT < 2:1891522/104‑1 ACATCAATGGCTGCTGAAAAGGAGCTACCATGCGCGCTGACATCCGTTCCGGCGGCTGGTACCACCGCCTCGTGGTCTACCTGCTGTTCCTGATCCTGCTGCTGCCCCTGGCCGGCACCCTCCTCTACTCGCTGGCCACCAGCTGGTCGGCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1924110‑1923957‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgagTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGT > NC_002947/1923984‑1924084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |