New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1947818 = | 32 (0.340) | 4 (0.050) | 4/198 | NT | 12.6% | intergenic (‑36/+134) | PP_1748/PP_1749 | hypothetical protein/acetyltransferase |
? | NC_002947 | 1947937 = | 30 (0.410) | intergenic (‑155/+15) | PP_1748/PP_1749 | hypothetical protein/acetyltransferase |
TATCGACCTGCTGTTTCCCCATAGCCGGCCGTTGGCCTGACAACTGCTCGGCTTTTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1947991‑1947818 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgacacaaggccgctcccacaaAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGCTGCCCGGCATCA > NC_002947/1947937‑1948081 TATCGACCTGCTGTTTCCCCATAGCCGGCCGTTGGCCTGACAACTGCTCGGCTTTTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTT < 1:1657517/150‑1 CGACCTGCTGTTTCCCCATAGCCGGCCGTTGGCCTGACAACTGCTCGGCTTTTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGC < 1:1316508/150‑1 CGACCTGCTGTTTCCCCATAGCCGGCCGTTGGCCTGACAACTGCTCGGCTTTTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGC < 1:529095/150‑1 ACCTGCTGTTTCCACATAGCCGGCCGGTGGCCGGACAGCTGCTCGGCTTTTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGA < 2:1960233/150‑1 GCTGTTTCCCCATAGCCGGCCGTTGGCCTGACAACTGCTCGGCTTTTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACA > 2:2233212/1‑150 GTTTCCCCATAGCCGGCCGTTGGCCTGACAACTGCTCGGCTTTTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGG < 2:558060/150‑1 TTTCCCCATAGCCGGCCGTTGGCCTGACAACTGCTCGGCTTTTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACCCAAGGC > 1:669931/1‑150 CCCATAGCCGGCCGTTGGCCTGACAACTGCTCGGCTTTTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTT > 2:182472/1‑133 CCCATAGCCGGCCGTTGGCCTGACAACTGCTCGGCTTTTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTT < 1:182472/133‑1 CCATAGCCGGCCGTTGGCCTGACAACTGCTCGGCTTTTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTC < 1:1648407/150‑1 ATAGCCGGCCGTTGGCCTGACAACTGCTCGGCTTTTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCC > 2:783520/1‑150 ACAACTGCTCGGCTTTTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTC > 1:1702474/1‑129 ACAACTGCTCGGCTTTTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTC < 2:1702474/129‑1 AACTGCTCGGCTTTTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAG > 2:1439830/1‑120 AACTGCTCGGCTTTTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAG < 1:1439830/120‑1 GGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAA > 2:1761995/1‑150 TCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGGTTCGCTGCCGATATTGCCGGGGCCGATTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGT > 2:506777/1‑150 GCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCA < 2:1784764/145‑1 GCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCA > 1:1784764/1‑145 tcCGCGCCACAAGGCCGCTCCCACAAAAAGCCTAGCAGTTCTCATTCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATACAACGCTGGGCGGTGGGCTGCTGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACG < 1:733549/148‑1 TTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACG > 1:571789/1‑150 CGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTA < 1:321065/150‑1 CGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTACGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACT > 1:2277987/1‑150 ACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGG < 1:1761995/150‑1 ACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGG > 2:2150299/1‑150 ACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTAGGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGG < 2:202437/150‑1 AAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTT > 1:637433/1‑103 AAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTT < 2:637433/103‑1 AAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTAGTAAGGGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGCT > 1:2368987/1‑150 GCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGCTGCC > 2:757403/1‑150 CGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCAATAAAACGCTAGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGCTGCCCG > 1:2219036/1‑150 GCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGCTGCCCGG > 1:237667/1‑150 CCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGCTGCCCGGTATC > 1:328187/1‑150 CCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGCTGCCCGGCATC > 1:420166/1‑150 CACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGCTGCCCGGCATCA > 1:1006760/1‑150 ACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTG < 1:761331/92‑1 ACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTG > 2:761331/1‑92 TATCGACCTGCTGTTTCCCCATAGCCGGCCGTTGGCCTGACAACTGCTCGGCTTTTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1947991‑1947818 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgacacaaggccgctcccacaaAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGCTGCCCGGCATCA > NC_002947/1947937‑1948081 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |