| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1968088 = | 92 (0.990) | 6 (0.070) | 6/224 | NT | 6.3% | intergenic (‑56/+102) | yciK/gph | putative oxidoreductase/phosphoglycolate phosphatase |
| ? | NC_002947 | 1968145 = | 96 (1.150) | intergenic (‑113/+45) | yciK/gph | putative oxidoreductase/phosphoglycolate phosphatase | |||||
GTGGTGGACCACCCGCTGGAACTGCGCAAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1968249‑1968088‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcattcgcgggtGAACCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGCGCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTTGTTGGGGTTGTCCTCTGGATGAATA > NC_002947/1968145‑1968292 GTGGTGGACCACCCGCTGGAACTGCGCAAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGAC < 1:341437/150‑1GTGGTGGACCACCCGCTGGAACTGCGCAAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGAC < 2:2364267/150‑1 GTGGACCACCCGCTGGAACTGCGCAAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCA > 2:720118/1‑150 GTGGACCACCCGCTGGAACTGCGCAAAGTGATCGACAGCGCGCTGTGCGGCTGCTGAACCCAGTCCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCc > 2:1329861/1‑149 GACCACCCGCTGGAACTGCGCAAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTC > 1:1327181/1‑150 CCACCCGCTGGAACTGCGCAAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGC < 2:129556/150‑1 CCACCCGCTGGAACTGCGCAAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGC < 2:2431479/150‑1 CACCCGCTGGAACTGCGCAAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCG < 2:2418047/150‑1 ACCCGCTGGAACTGCGCAAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGG > 1:430511/1‑150 CCGCTGGAACTGCGCAAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGT > 2:440065/1‑150 CCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTACGAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGCGCGCTGTCGATC > 2:738208/1‑150 CCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGG > 1:140612/1‑53 CCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGG < 2:140612/53‑1 CGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGCGCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTG > 1:27012/1‑150 GCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTGAACCCGCTCCTACAAAAGCAAGCTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCTCAGCGCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGG > 1:158317/1‑150 GAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTGAACCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGG > 2:177302/1‑94 GAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTGAACCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGG < 1:177302/94‑1 CTGATCGGACGCATTCGCGGGTAAACCCGCTCCTACGAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGCGCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTTGTTGG < 1:738208/150‑1 GCATTCGCGGGTGAACCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGCGCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTTGTTGGGGTTGTCCTC > 2:306224/1‑150 ATTCGCGGGTGAACCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGCGCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTTGTTGGGGTTGTCCTCTG < 2:158317/150‑1 ATTCGCGGGTGAACCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGCGCGCTGTCGATCACTTTGCGCAGTTCCAGC > 2:331200/1‑101 ATTCGCGGGTGAACCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGCGCGCTGTCGATCACTTTGCGCAGTTCCAGC < 1:331200/101‑1 TCGCGGGTGAACCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGTGCGCGGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTTGTTGGGGTTGTCCTCTGGA < 2:2019908/150‑1 GGGTGACCCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGCGCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTCGTTGGGGTTGTCCTCTGGATGAA > 2:883247/1‑150 GGTGAACCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGCGCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTTGTTGGGGTTGTCCTCTGGATGAAT < 2:603562/150‑1 GTGAACCCGCTCCTACAAAAGGGCGGAGCCCGGTAATCGGCAAGCGATCAGCACCCGCCCAGCGCGCTGTCTATGACTGTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTTGTTGGGGTTGTCCTCTGGATGAATA > 2:867271/1‑150 GTGGTGGACCACCCGCTGGAACTGCGCAAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1968249‑1968088‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcattcgcgggtGAACCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGCGCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTTGTTGGGGTTGTCCTCTGGATGAATA > NC_002947/1968145‑1968292 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |