| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2052897 | 93 (1.000) | 6 (0.070) | 6/232 | NT | 6.7% | coding (747/783 nt) | PP_1828 | hypothetical protein |
| ? | NC_002947 | = 2052913 | 82 (0.950) | coding (731/783 nt) | PP_1828 | hypothetical protein | |||||
GGGCATGGGGTGTTCATGCTCACCGCCGAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2052740‑2052897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcctggTGGCGTTTGCCGTGTTCCAGGCAGGGCTGTTGATCTGGATTGCTACCCGCTAAGACCGCATCAGCCGGGGGAAATTAGGGCCGCTTCGCGGCCCCAAATAGCCTAAACGAGGGCCTTGAACAATTCCTGATGCTGGCGGCACTGC < NC_002947/2052913‑2052769 GGGCATGGGGTGTTCATGCTCACCGCCGAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCC > 2:533040/1‑150GGGCATGGGGTGTTCATGCTCACCGCCGAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCC < 1:2105584/150‑1 GCATGGGGTGTTCATGCTCACCGCCGAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCT < 1:1559902/150‑1 ATGGGGTGTTCATGCTCACCGCCGAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGC > 1:1551874/1‑150 ATGGGGTGTTCATGCTCACCGCCGAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGC < 2:2210999/150‑1 GGTGTTCATGCTCACCGCCGAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGG < 2:1493176/150‑1 acTGCCGCCAGCATCAGGAATTGTTCAAGGCCATCATTTACGAAATGTTGGGCCGCGAAGCGGCCCTACTTTCTATCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGTGGCGTTTGCCGTGTTCCAGGCA < 1:533040/148‑1 AGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGTGGCGTTTGCCGTGTTCCAGGCAGGGCTGTTGATCTGG < 2:1010008/150‑1 AAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCC < 1:2242601/93‑1 AAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCC > 2:2242601/1‑93 CCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGTGGCGTTTGCCGTGTTCCAGGCAG < 2:1025147/120‑1 CCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGTGGCGTTTGCCGTGTTCCAGGCAG > 1:1025147/1‑120 GGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGTGGCGTTTGCCGTGTTCCAGG < 1:2109162/62‑1 GGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGTGGCGTTTGCCGTGTTCCAGG > 2:2109162/1‑62 tCCCTGCCTGGTTGCGTTTGCCGTGTTCCAGGCAGGGCTGTTGATCTGGATTGCTACCCGCTAAGACCGCATCAGCCGGGGGAAATTAGGGCCGCGTCGCGGCCCCAAATAGCCTAAACGAGGGCCTTGAACAATTCCTGATGCTGGCGG < 2:359915/149‑1 CCTGCCTGGTGGCGTTTGCCGTGTTCCAGGCAGGGCTGTTGATCTGGATTGCTACCCGCTAAGACCGCATCAGCCAGGGGAAATT < 2:1661961/85‑1 CCTGCCTGGTGGCGTTTGCCGTGTTCCAGGCAGGGCTGTTGATCTGGATTGCTACCCGCTAAGACCGCATCAGCCAGGGGAAATT > 1:1661961/1‑85 GCCTGGTGGCGTTTGCCGTGTTCCAGGCAGGGCTGTTGATCTGGATTGCTACCCGCTAAGACCGCATCAGCCGGGGGAAATTAGGGCCGCTTCGCGGCCCCAAATAGCCTAAACGAGGGCCTTGAACAATTCCTGATGCTGGCCTCACTG < 2:1271438/150‑1 CCTGGTGGCGTTTGCCGTGTTCCAGGCAGGGCTGTTGATCTGGATTGCTACCCGCTAAGACCGCATCAGCCGGGGGAAATTAGGGCCGCTTCGCGGCCCCAAATAGCCTAAACGAGGGCCTTGAACAATTCCTGATGCTGGCGGCACTGC > 1:2168882/1‑150 GGGCATGGGGTGTTCATGCTCACCGCCGAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2052740‑2052897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcctggTGGCGTTTGCCGTGTTCCAGGCAGGGCTGTTGATCTGGATTGCTACCCGCTAAGACCGCATCAGCCGGGGGAAATTAGGGCCGCTTCGCGGCCCCAAATAGCCTAAACGAGGGCCTTGAACAATTCCTGATGCTGGCGGCACTGC < NC_002947/2052913‑2052769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |