New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2086488 = | NA (NA) | 4 (0.050) | 4/238 | NT | NA | coding (560/1302 nt) | PP_1865 | transposase |
? | NC_002947 | 2086514 = | NA (NA) | coding (586/1302 nt) | PP_1865 | transposase |
TTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGCTTGCCACTCACCTTCCTGGATCAAGCGTGGATGCTTGGCCTGCTGGCGAATGACAAATGATGTCTTCACCTGTTCGCACGCCTCCATTACAGGCAGCGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2086642‑2086488 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtgcGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGAC > NC_002947/2086514‑2086661 TTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGCTTGCCACTCACCTTCCTGGATCAAGCGTGGATGCTTGGCCTGCTGGCGAATGACAAATGATGTCTTCACCTGTTCGCACGCCTCCATTACAGGCAG < 2:2294079/150‑1 TTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGCTTGCCACTCACCTTCCTGGATCAAGCGTGGATGCTTGGCCTGCTGGCGAATGACAAATGATGTCTTCACCTGTTCGCACGCCTCCATTACAGGCAGC > 1:2206813/1‑150 TTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGCTTGCCACTCACCTTCCTGGATCAAGCGTGGATGCTTGGCCTGCTGGCGAATGACAAATGATGTCTTCACCTGTTCGCACGCCTCCATTACAGGCAGCG > 1:916477/1‑150 TACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCAGCGGTGCTTGCCACTCACCTTCCTGGATCAAGCGTGGATGCTTGGCCTGCTGGCGAATGACAAATGATGTCTTCACCTGTTCGCACGCCTCCATTACAGGCAGCGT < 1:512061/150‑1 ACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACTGGCATCGGTGCTTGCCACTCACCTTCCTGGATCAAGCGTGGATGCTTGGCCTGCTGGCGAATGACAAATGATGTCTTCACCTGTTCGCACGCCTCCATTACAGGCAGCGTG < 1:1697164/150‑1 ACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGCTTGCCACTCACCTTCCTGGATCAAGCGTGGATGCTTGGCCTGCTGGCGAATGACAAATGATGTCTTCACCTGTTCGCACGCCTCCATTACAGGCCGCGTG < 1:1920251/150‑1 CTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGCTTGCCACTCACCTTCCTGGATCAAGCGTGGATGCTTGGCCTGCTGGCGAATGACAAATGATGTCTTCACCTGTTCGCACGCCTCCATTACAGGCAGCGTGC > 1:49780/1‑150 CTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGCTTGCCACTCACCTTCCTGGATCAAGCGTGGATGCTTGGCCTGCTGGCGAATGACAAATGATGTCTTCACCTGTTCGCACGCCTCCATTACAGGCAGCGTGC > 2:315084/1‑150 TTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGCGCATCGGTGCTTGCCACTCACCTTCCTGGATCAAGCGTGGATGCTTGGCCTGCTGGCGAATGACAAATGATGTCTTCACCTGTTCGCACGCCTCCAGTACAGGCCGCGTGCG > 1:999204/1‑150 GCCACTCACCTTCCTGGATCAAGCGTGGATGCTTGGCCTGCTGGCGAATGACAAATGATGTCTTCACCTGTTCGCACGCCTCCATTACAGGCAGC < 2:513350/95‑1 GCCACTCACCTTCCTGGATCAAGCGTGGATGCTTGGCCTGCTGGCGAATGACAAATGATGTCTTCACCTGTTCGCACGCCTCCATTACAGGCAGC > 1:513350/1‑95 GGATCAAGCGTGGATGCTTGGCCTGCTGGCGAATGACAAATGATGTCTTCACCTGTTCGCACGCCTCCATTACAGGCAGCGT > 2:2338476/1‑82 GGATCAAGCGTGGATGCTTGGCCTGCTGGCGAATGACAAATGATGTCTTCACCTGTTCGCACGCCTCCATTACAGGCAGCGT < 1:2338476/82‑1 GATCAAGCGTGGATGCTTGGCCTGCTGGCGAATGACAAATGATGTCTTCACCTGTTCGCACGCCTCCATTACAGGCAGCGT < 1:1108409/81‑1 GATCAAGCGTGGATGCTTGGCCTGCTGGCGAATGACAAATGATGTCTTCACCTGTTCGCACGCCTCCATTACAGGCAGCGT > 2:1108409/1‑81 TTCACCTGTTCGCACGCCTCCATTACAGGCAGCGTGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCA > 2:1742427/1‑150 TTCGCACGCCTCCATTACAGGCAGCGTGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAG < 2:1332613/71‑1 TTCGCACGCCTCCATTACAGGCAGCGTGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAG > 1:1332613/1‑71 CGCACGCCTCCATTACAGGCAGCGTGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAA < 1:1742427/150‑1 GCGTGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGG < 2:1982158/150‑1 cggGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGC < 2:1714742/147‑1 CGTGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGC < 1:2294079/150‑1 CGTGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGC < 2:1623943/150‑1 GTGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGG > 2:1691630/1‑138 GTGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGG < 1:1691630/138‑1 GTGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCC < 2:992169/121‑1 GTGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCC > 1:992169/1‑121 GTGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGC > 2:1696648/1‑110 GTGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGC < 1:1696648/110‑1 GTGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGT > 2:1813376/1‑74 GTGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGT < 1:1813376/74‑1 TGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGA > 1:630876/1‑150 TGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGA > 1:2285155/1‑150 TGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGA < 1:1856356/150‑1 TGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAA > 1:376673/1‑126 TGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAA < 2:376673/126‑1 TGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATC < 2:1807883/60‑1 TGCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATC > 1:1807883/1‑60 GCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGAC < 1:561774/150‑1 GCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCT < 1:2425575/144‑1 GCGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCT > 2:2425575/1‑144 TTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGCTTGCCACTCACCTTCCTGGATCAAGCGTGGATGCTTGGCCTGCTGGCGAATGACAAATGATGTCTTCACCTGTTCGCACGCCTCCATTACAGGCAGCGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2086642‑2086488 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtgcGAACAGGTGAAGACATCATTTGTCATTCGCCAGCAGGCCAAGCATCCACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGAC > NC_002947/2086514‑2086661 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |