New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2128264 =	77 (0.830)	4 (0.050)	6/234	NT	5.6%	coding (3592/3873 nt)	PP_1887	hypothetical protein
	?	NC_002947	2128288 =	62 (0.710)					coding (3616/3873 nt)	PP_1887	hypothetical protein

CATCACTGATCAGGTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTGCCGGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2128420‑2128264 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggatcATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGTGATGAGCAGGGGCGGGTAC  >  NC_002947/2128288‑2128435                                                                                                                                                                                                                                                                                                                   CATCACTGATCAGGTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTG                                                                                                                                                             >  2:2228159/1‑150  ATCACTGATCAGGTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTGC                                                                                                                                                            <  1:339815/150‑1    CACTGATCAGGTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTGCCG                                                                                                                                                          <  1:1345957/150‑1      CTGATCAGGTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTGCCGGA                                                                                                                                                        >  1:794191/1‑150       TGATCAGGTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTGCCGGAT                                                                                                                                                       >  1:1720101/1‑150        GATCAGGTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTGCCGGATC                                                                                                                                                      >  2:712756/1‑150              GTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCACAAATGAGCCGGATCATNCCG                                                                                                                                                <  2:1509660/150‑1                                    AAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTG                                                                                                                                                             >  1:2397772/1‑115                                    AAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTG                                                                                                                                                             <  2:2397772/115‑1                                                                 GACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGC                                                                                                                                        >  1:557136/1‑107                                                                 GACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGC                                                                                                                                        <  2:557136/107‑1                                                                            ACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCACAAATGAGCCGGATCATTCC                                                                                                                                                 >  1:26645/1‑87                                                                            ACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCACAAATGAGCCGGATCATTCC                                                                                                                                                 <  2:26645/87‑1                                                                                                                                       ATCCGGCTCATTTGTGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCA                       >  1:911781/1‑150                                                                                                                                                      GCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGTGATGAGCAGGGGC        <  1:2158772/150‑1                                                                                                                                                        CGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGGTCATGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCCTTACGACGGCAATGGCAACCTGATCAGTGATGAGCAGCGGCGG      >  1:2398984/1‑150                                                                                                                                                         GGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGTGATGAGCAGGGGCGGG     <  2:1782557/150‑1                                                                                                                                                         GGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGTGATGAGCAGGGGCGGG     >  1:1782557/1‑150                                                                                                                                                            TCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGTGATGAGCAGGGGCGGGTAC  >  1:1142593/1‑150                                                                                                                                                                                                                                                                                                                   CATCACTGATCAGGTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTGCCGGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2128420‑2128264 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggatcATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGTGATGAGCAGGGGCGGGTAC  >  NC_002947/2128288‑2128435

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.