New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2340736 = | 89 (0.950) | 13 (0.140) | 11/248 | NT | 14.2% | intergenic (+27/‑88) | dctA‑II/yraO | C4‑dicarboxylate transport protein/transporter YraO |
? | NC_002947 | 2340767 = | 69 (0.750) | intergenic (+58/‑57) | dctA‑II/yraO | C4‑dicarboxylate transport protein/transporter YraO |
CGTTTACTCATGATCAGGTAGGTGAAGGTCACCACCATGATCAGGCCCAGAAGTGCGAGCATGGTTTGTTCTCTTGTTTTTATTGTCTATGTGGCCACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2340885‑2340736 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTAAACGCCTGTCAC > NC_002947/2340767‑2340893 CGTTTACTCATGATCAGGTAGGTGAAGGTCACCACCATGATCAGGCCCAGAAGTGCGAGCATGGTTTGTTCTCTTGTTTTTATTGTCTATGTGGCCACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCC < 2:365016/150‑1 CATGATCAGGCCCAGAAGTGCGAGCATGGTTTGTTCTCTTGTTTTTATTGTCTATGTGGCCACCTGCAGCGCAGACGGCCCCCTGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCGTCT < 1:50349/127‑1 CATGATCAGGCCCAGAAGTGCGAGCATGGTTTGTTCTCTTGTTTTTATTGTCTATGTGGCCACCTGCAGCGCAGACGGCCCCCTGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCGTCT > 2:50349/1‑127 ACCCCCACCCGGCAACGCCTGGTGGGGGCCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGA > 1:274296/1‑64 ACCCCCACCCGGCAACGCCTGGTGGGGGCCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGA < 2:274296/64‑1 CCCCACCCGGCAACGCCTGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTAAACGCCT > 1:2396219/1‑150 CCCCACCCGGCAACGCCTGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTT > 1:1927455/1‑123 CCCCACCCGGCAACGCCTGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTT < 2:1927455/123‑1 CCCACCCGGCAACGCCTGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTG > 1:467120/1‑114 CCCACCCGGCAACGCCTGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTG < 2:467120/114‑1 CCCACCCGGCAACGCCTGGTGGGGGCCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTAAACGCCTG > 1:1956665/1‑150 CCACCCGGCAACGCCTGGTGGGGGCCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTAAACGCCTGT > 1:2152682/1‑150 GCAACGCCTGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTAAACGCCTGTCAC < 1:642038/146‑1 GCAACGCCTGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTAAACGCCTGTCAC > 2:642038/1‑146 CGTTTACTCATGATCAGGTAGGTGAAGGTCACCACCATGATCAGGCCCAGAAGTGCGAGCATGGTTTGTTCTCTTGTTTTTATTGTCTATGTGGCCACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2340885‑2340736 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTAAACGCCTGTCAC > NC_002947/2340767‑2340893 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |